PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027076646.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family Nin-like
Protein Properties Length: 329aa    MW: 37710.5 Da    PI: 8.0105
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027076646.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK83.12.7e-26202251352
          RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                     +++ ledl+kyF+lpi +A+k+L+v+lTvLK++CR++GI+RWPhRkiksl
  XP_027076646.1 202 ARLALEDLAKYFDLPIIEASKNLKVGLTVLKKKCREFGIPRWPHRKIKSL 251
                     6899********************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MASLQASPPL KALVVFRNRI HKELIRSIHV YQLEGGAEEV VEREYLFLEN LEYEEMKFLG  60
KVFTLQKFDV SAHFAGMANG VWDCIYVFNM DLDKQPNLEM IPEDLSITRN PKLASIPSLS  120
NDLQMIFKLG HKIECGDPSK VLPKEGEEIH SDVGHLTQRA QHVPVLDLNS LPCSGSDNEE  180
NNQNAAGVVE KKQKRAATKD IARLALEDLA KYFDLPIIEA SKNLKVGLTV LKKKCREFGI  240
PRWPHRKIKS LDSLIQDLQG EVKRQLEEDE AAAMAVAKRQ RMIESEKESI EKKPFLDIQW  300
ETKKFRQDIF KRRHRARALE NQSRTLSLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.12e-71Nin-like family protein