PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027074815.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

Dof

Protein Properties

Length: 512aa MW: 55395.7 Da PI: 5.3763

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027074815.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.2	9.9e-40	147	207	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s XP_027074815.1 147 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSV 207 7899******************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MSEAKDPAIK LFGKTIQLPE APAAAAASEC GGDASALSND ISADDTLVQD RPSSPDSLPE 60 DSNLDRSGAE EESDKDFSGE KGNDSKTEDG AQSMMPEELI DPTLSSLTKE SSKAPSVDSE 120 AAPAKASKAE DEQNETSNSQ DKTLKKPDKI LPCPRCNSMD TKFCYYNNYN VNQPRHFCKN 180 CQRYWTAGGT MRNVPVGAGR RKNKNSVSQY RHISVSETLH NSQPDLPNGI HHPTLKPNGT 240 VLTFGSDAPL CESMASVLNI AEKTMQNCTR NGFHRPEELR IPVPYGTGGN GDEHLSGSSV 300 TTLSSKDEAS KDSLPDKQMP NCQSISPQVP CFPGAPWPPY PWNCIPWGSS VPPAAFCPPG 360 FPMQFYPAAP YWGCTVPGTW TVPWLSPPPT SQNLNSRTSG PNSPTLGKHS RDDSIMKPVD 420 SKKEEPQKES NPEKCLWVPK TLRIDDPGEA ARSSIWATLG IKIDKVDSVG GAGLFKAFQP 480 KGDEKTRVSE TSTVLQANPA ALSRSLSFHE ML

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MSEAKDPAIK LFGKTIQLPE APAAAAASEC GGDASALSND ISADDTLVQD RPSSPDSLPE  60
DSNLDRSGAE EESDKDFSGE KGNDSKTEDG AQSMMPEELI DPTLSSLTKE SSKAPSVDSE  120
AAPAKASKAE DEQNETSNSQ DKTLKKPDKI LPCPRCNSMD TKFCYYNNYN VNQPRHFCKN  180
CQRYWTAGGT MRNVPVGAGR RKNKNSVSQY RHISVSETLH NSQPDLPNGI HHPTLKPNGT  240
VLTFGSDAPL CESMASVLNI AEKTMQNCTR NGFHRPEELR IPVPYGTGGN GDEHLSGSSV  300
TTLSSKDEAS KDSLPDKQMP NCQSISPQVP CFPGAPWPPY PWNCIPWGSS VPPAAFCPPG  360
FPMQFYPAAP YWGCTVPGTW TVPWLSPPPT SQNLNSRTSG PNSPTLGKHS RDDSIMKPVD  420
SKKEEPQKES NPEKCLWVPK TLRIDDPGEA ARSSIWATLG IKIDKVDSVG GAGLFKAFQP  480
KGDEKTRVSE TSTVLQANPA ALSRSLSFHE ML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	1e-102	Dof family protein