PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027072798.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bZIP

Protein Properties

Length: 334aa MW: 37146.8 Da PI: 9.8067

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027072798.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	47.7	3.5e-15	264	307	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lk + XP_027072798.1 264 RRQKRMIKNRESAARSRARKQAYTHELENKVTRLEEENERLKRQ 307 79************************************999954 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MGSQGGVGKS TVGGTQIHEP KSSSLARQGS LYSLTLDEVQ HHLGDLGKPL SSMNLDELLK 60 TVWTAEANQG TGGVDYGVHQ HGQLPLALNR QSSLTLSRDL SKKTVDEVWQ DIQQGQKHNY 120 ERKAQERQIT LGEITLEDFL VKAGVVAEPT PSKNSGSSLG VDAVVLQQQN VPPQSQWTHY 180 QIPSIHQSPP PQQQQQQNIM PVFMPGHPVQ PQLTIGSNPM MDSAYPETQM TMSPSTLMGT 240 LSDTQTPGRR RVGSGDVIQK TVERRQKRMI KNRESAARSR ARKQAYTHEL ENKVTRLEEE 300 NERLKRQREM EKALTTVPPP EPKYQLRRTS SGPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	1e-100	bZIP family protein