PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027071912.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | FAR1 | ||||||||
Protein Properties | Length: 156aa MW: 18070.7 Da PI: 8.8407 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 70.7 | 3.5e-22 | 11 | 98 | 1 | 89 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 kfYn+YA ++GFsv k++ +k ++g +t+r++ C keg +++ +++ + +rtr+ t+t C ak+++ + + + k++v++l+le nHel XP_027071912.1 11 KFYNKYAFKMGFSVHKDYLNKD-KDGVTTSRRYSCCKEGVTRKYESD-VMPKRTRVLTKTRCGAKMVIVLLRgTMKYRVHDLVLEYNHEL 98 6*****************9998.8999****************9999.999*****************99998****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 156 aa Download sequence |
MEFNSEEDAY KFYNKYAFKM GFSVHKDYLN KDKDGVTTSR RYSCCKEGVT RKYESDVMPK 60 RTRVLTKTRC GAKMVIVLLR GTMKYRVHDL VLEYNHELHI AQCSHMMPSQ RKVSEAQGFQ 120 VEISEDAGLS LKQSHEFMGK EIGGMGNVGY TWDDLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-17 | FAR1 family protein |