PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027071738.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | HSF | ||||||||
Protein Properties | Length: 394aa MW: 44820.5 Da PI: 7.9929 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 27.6 | 7.7e-09 | 43 | 80 | 2 | 39 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHH CS HSF_DNA-bind 2 Flkklyeiledeelkeliswsengnsfvvldeeefakk 39 Fl+k+++++ed e+k++isw+++g+s++vld+ +fa + XP_027071738.1 43 FLTKTFQMVEDTETKNMISWNSEGTSLIVLDHLKFAAE 80 9**********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 394 aa Download sequence |
MEVRGGEIAG NGGIVRPSSL PSKQASEKIE FMKGVRGFTP PPFLTKTFQM VEDTETKNMI 60 SWNSEGTSLI VLDHLKFAAE GFKKIGLRQY EYENKWFQRG QEHLLMNIRR RNDEDPTIRK 120 RRGLRKQHVT AARPSMEAEL EIFEDHVNAL KEDITRSKYH MGKLESSIAT FKKNVKRMEA 180 KSKALIKVFA RIFSPALVEK IIQRVEKEPE LEILQTMKRR RVILPQSSKT TTKSMDDGAC 240 GMDQDDQEAN TSMAESKKSA DQNLWKKFMG DDSVSEDESE QQLLKQHSRI DMGFDDLMVS 300 KIVNAKEPNL DMEDEVVVDL WTVSLGAVSR RGEKTAVRRV DAAEFCASFG LVTGREDCAL 360 GQCLNTKLLM VFMMSTITMF DNPPVLIIHS VLQF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 218 | 222 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G22830.1 | 2e-21 | HSF family protein |