PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027071691.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 420aa    MW: 48025.5 Da    PI: 6.0436
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027071691.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM108.67.5e-34682191128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.............................kvkaeekewyfFskrdk 66 
                     +p+G+rF Ptdeel+v+yL+k++++ +l+l + i+e+++y ++P++L +                             +  ++ + wyfF+   +
  XP_027071691.1  68 MPRGYRFCPTDEELIVHYLRKRIAKAPLPL-NRIHEANVYGHNPQELTMtvdhentiiiemrfgvrgflidahryisdS-IHNVNGWYFFTYLTN 160
                     699***************************.77**************8558999********99999999888765532.23677********** PP

             NAM  67 kyatgkrknr.atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ky++g+r++r   + g+Wk tgkdk+++  +g++vg +k+L f       gekt W mheyr+
  XP_027071691.1 161 KYPKGSRPSRsCGDGGFWKPTGKDKKIYY-NGNTVGYRKSLDFLL---GPGEKTAWKMHEYRI 219
                     **********666799*************.999***********5...45678********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 420 aa     Download sequence    
MDNHQQQREE QPYLLHDHLL HHHWPPLQGQ QQQPLQHQHQ LYPLNDQQQP VPQGIILHEN  60
SQNFLDSMPR GYRFCPTDEE LIVHYLRKRI AKAPLPLNRI HEANVYGHNP QELTMTVDHE  120
NTIIIEMRFG VRGFLIDAHR YISDSIHNVN GWYFFTYLTN KYPKGSRPSR SCGDGGFWKP  180
TGKDKKIYYN GNTVGYRKSL DFLLGPGEKT AWKMHEYRIH ANNPKSDPVL CRLYMNIRRK  240
NKDESEGDTV ELMRENLDQC FTVNEAPMQN EDNDLAVGNI SSAGSTNNQC MEYITSTLDT  300
GGDAISNQVI YDLSSFQFPD HPFQDFQGYT NSHGGLEAIT QEFTEPFHLS KGTMMPSNLS  360
MEPFHLSRGT MIPSDLNMED VSKYAIGGTD LSDLAWQNGC AGGYVNMTSL QIDGENSGNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.11e-29NAC family protein