PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027071068.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bZIP

Protein Properties

Length: 286aa MW: 32259.6 Da PI: 7.7216

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027071068.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	28.2	4.1e-09	143	197	5	59
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 kr++r NR +A rs +RK ++i +Leek k+L ++ L ++l + + e +l XP_027071068.1 143 KRAKRIVANRHSAARSKERKAQYIVNLEEKLKTLNSQVALLNNRLTTTQRETTEL 197 9************************************988887777766665555 PP

Sequence ? help Back to Top
Protein Sequence Length: 286 aa Download sequence
MISSPFKGSL DCAWTPELTV KAFDNDDDNV IVDFDIDFDD DLFSIYMDVK KLEEKENNVN 60 VGLDNDVLQN GGGFVAGSCG GGRCRGRRKR KDKSKTAIIT TQPRKQRQRR GLKGCLVDEK 120 RFVEARKAMA PEELAELWAI DPKRAKRIVA NRHSAARSKE RKAQYIVNLE EKLKTLNSQV 180 ALLNNRLTTT QRETTELVAE KSELRCQLQT LESQTEQIDA QNAALKLEIQ WLKSVTGELD 240 DSCHVCQSES LQFPTSMSTH QKPLLHNCQP STLAPYLHVA SPQPLF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	87	92	RRKRKD
2	87	93	RRKRKDK
3	88	94	RRKRKDK
4	156	164	ARSKERKAQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40620.1	3e-30	bZIP family protein