PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027070675.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ERF | ||||||||
Protein Properties | Length: 204aa MW: 21366.8 Da PI: 5.5306 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.6 | 1.8e-19 | 29 | 78 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 y+GVr++k++g+Wv+eIr+p r r++lg+f t+e+Aa+a++ a+++l+g XP_027070675.1 29 YRGVRRRKSSGKWVSEIREP-----RtpNRIWLGTFPTPEMAAAAYDVAALALKG 78 9******************9.....4478***********************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MSSSSSGTSS GNSGSSTSQA PLPGRRPMYR GVRRRKSSGK WVSEIREPRT PNRIWLGTFP 60 TPEMAAAAYD VAALALKGPE AELNFPNSAS SLPAPASASP RDIQAAAASA AAAAGAAMDA 120 LAGNAAALHA MNHALADKTE THISPTPPDH QKDHEFIDED LIFDMPNVLT NMAEGMLLSP 180 PRLDIAGDET STESMGAHDL WNHP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 3e-21 | ERF family protein |