PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027070297.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

bZIP

Protein Properties

Length: 527aa MW: 58844.1 Da PI: 7.3206

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027070297.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.3	5.2e-11	233	266	5	38
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeL 38 k rr+++NReAAr+sR+RKka++++Le +L XP_027070297.1 233 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIKL 266 7789***********************9754444 PP

Sequence ? help Back to Top
Protein Sequence Length: 527 aa Download sequence
MGFARALVET STEQESKLFV GGASNSINSS PFMASSNKTN NHTTQIVLDQ QQHQSPVPSQ 60 IHPSHHQHLH QDHHAHHHQH QHQHHQQNIN QISFGMMQSS SSAIPGNFIS KDTGAYDLGE 120 LDQALFLYLD GQEPSAIQEQ RQNSGMRPPT LNIFPSQPMH VDPSSAKAST GLVSNSPSSS 180 GSKRSSEPSM ELSNPRNDVA SAPEPAKAVK REGNRRGPTS SSEQEGPKTP DPKTLRRLAQ 240 NREAARKSRL RKKAYVQQLE SSRIKLTQLE QEIQRARSQG IYFGGASALL GGDQSMPAPM 300 GNISSVADAT VFDMEYSRWL EEHHRLMCEL RNAVQEHLPE NELRLFVDNC LAHYDEVMNL 360 KSMIAKSDVF HLVSGMWKTP AERCFMWMGG FRPSELIKII MSQIEPLTEQ QLLAICGLQQ 420 STQEAEEALS QGLEALNQSL SDTIASDALS CPSNMANYMG QMALAMNKLS TLEGFVRQAD 480 NLRHQTIHRL HQILTTRQAA RCFLAIAEYF HRLRALSSLW LARPRQE

Sequence ? help Back to Top

Protein Sequence Length: 527 aa Download sequence

MGFARALVET STEQESKLFV GGASNSINSS PFMASSNKTN NHTTQIVLDQ QQHQSPVPSQ  60
IHPSHHQHLH QDHHAHHHQH QHQHHQQNIN QISFGMMQSS SSAIPGNFIS KDTGAYDLGE  120
LDQALFLYLD GQEPSAIQEQ RQNSGMRPPT LNIFPSQPMH VDPSSAKAST GLVSNSPSSS  180
GSKRSSEPSM ELSNPRNDVA SAPEPAKAVK REGNRRGPTS SSEQEGPKTP DPKTLRRLAQ  240
NREAARKSRL RKKAYVQQLE SSRIKLTQLE QEIQRARSQG IYFGGASALL GGDQSMPAPM  300
GNISSVADAT VFDMEYSRWL EEHHRLMCEL RNAVQEHLPE NELRLFVDNC LAHYDEVMNL  360
KSMIAKSDVF HLVSGMWKTP AERCFMWMGG FRPSELIKII MSQIEPLTEQ QLLAICGLQQ  420
STQEAEEALS QGLEALNQSL SDTIASDALS CPSNMANYMG QMALAMNKLS TLEGFVRQAD  480
NLRHQTIHRL HQILTTRQAA RCFLAIAEYF HRLRALSSLW LARPRQE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06839.3	0.0	bZIP family protein