PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027069994.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 468aa MW: 52289 Da PI: 6.8644

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027069994.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	116.3	3e-36	51	193	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee.vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk........ 79 lp+G++F+Ptd+el+ e+L++kvegk+ ++++ +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+++ XP_027069994.1 51 LPAGVKFDPTDQELI-EHLEAKVEGKEskshplIDEFIpTIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGTRKRRKIQtecdlqgg 143 799**********.99*****6665443333333666646******.555666799**************73334555544 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l XP_027069994.1 144 ETRWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 193 778********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MNKSLQSHQL GSGISSSDLI DAKLEEHQLC GSKHCPGCGH KLDGKPDWVG LPAGVKFDPT 60 DQELIEHLEA KVEGKESKSH PLIDEFIPTI EGEDGICYTH PEKLPGVTRD GLSRHFFHRP 120 SKAYTTGTRK RRKIQTECDL QGGETRWHKT GKTRPVMVNG KQKGCKKILV LYTNFGKNRK 180 PEKTNWVMHQ YHLGQHEEEK EGELVVSKIF YQTQPRQCNW TERATTNAGE GTNDSITRRD 240 SGGGSGSCSS REIMTSHGDE LSAAAVGAAI SSYGALDIQQ LKADQFSFLP YRKSFDEGGI 300 GEPSIVREGP GVAAAAAAVG TCEERDIPEH QRQHHVTHEL HHHHHHHHQQ IPTTAFHITR 360 PSHSISTIIS PPPLHHTSVI LDDDSFHHVS RLMLPTDNFQ QHQQQQQQPQ QQQHHKLGGR 420 SASGLEELIM GCTSTDIKEE SSITNPQETE WLKYSSFWPD PDNPDHHG

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MNKSLQSHQL GSGISSSDLI DAKLEEHQLC GSKHCPGCGH KLDGKPDWVG LPAGVKFDPT  60
DQELIEHLEA KVEGKESKSH PLIDEFIPTI EGEDGICYTH PEKLPGVTRD GLSRHFFHRP  120
SKAYTTGTRK RRKIQTECDL QGGETRWHKT GKTRPVMVNG KQKGCKKILV LYTNFGKNRK  180
PEKTNWVMHQ YHLGQHEEEK EGELVVSKIF YQTQPRQCNW TERATTNAGE GTNDSITRRD  240
SGGGSGSCSS REIMTSHGDE LSAAAVGAAI SSYGALDIQQ LKADQFSFLP YRKSFDEGGI  300
GEPSIVREGP GVAAAAAAVG TCEERDIPEH QRQHHVTHEL HHHHHHHHQQ IPTTAFHITR  360
PSHSISTIIS PPPLHHTSVI LDDDSFHHVS RLMLPTDNFQ QHQQQQQQPQ QQQHHKLGGR  420
SASGLEELIM GCTSTDIKEE SSITNPQETE WLKYSSFWPD PDNPDHHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-165	NAC family protein