PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027069548.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | G2-like | ||||||||
Protein Properties | Length: 414aa MW: 46498.4 Da PI: 7.4322 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 106.5 | 1.5e-33 | 45 | 99 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+Wtp+LHerF+eav+qLGG++kAtPk++l+lm+++gLtl+h+kSHLQkYRl XP_027069548.1 45 KPRLKWTPDLHERFIEAVNQLGGADKATPKSVLKLMGIQGLTLYHLKSHLQKYRL 99 79****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 62.6 | 7.8e-20 | 47 | 98 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT++++e++++av+qlGg t+k++ + mg +g+tl+++ks++qky+ XP_027069548.1 47 RLKWTPDLHERFIEAVNQLGGAdkaTPKSVLKLMGiQGLTLYHLKSHLQKYR 98 89******************99*****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 414 aa Download sequence |
MYHHHQQGKN IHSSSRMPIP PERHLFLQGG NGPGDSGLVL STDAKPRLKW TPDLHERFIE 60 AVNQLGGADK ATPKSVLKLM GIQGLTLYHL KSHLQKYRLS KNLHGQANCG TNKAAGDRIP 120 ETNAASIINP SIGSQANKNL HIGEAIQMQI EVQRRLHEQL EVQRHLQLRI EAQGKYLQAV 180 LEKAQETLGR QNLGSVGLEA AKVQLSELVS KMSDQCLNSA FSDMKELPGS CPQQTQTPQP 240 TDCSMDSCLT SCEGSLRDQE MHNNQMMLRP LNLRTDMEFN NMNNEASLQH AERRWCDDLM 300 KEKRKLVSTM NEEAEKACAA EKNIGNLSMS IGLQGGRWNS HHSYLEKRGR EAESEIKFFD 360 QPHNRYGPIP PETQRPSEEY KLPFFAPKLD LNTDDGADAG SRCKQFDLNG FSWS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04030.3 | 1e-131 | G2-like family protein |