PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027069047.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

E2F/DP

Protein Properties

Length: 485aa MW: 53369.1 Da PI: 4.8497

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027069047.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	84.8	6.7e-27	145	210	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg XP_027069047.1 145 RYDSSLGLLTKKFINLIKHAEDGILDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIHWKG 210 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 485 aa Download sequence
MSTPQAPSRG AAAGGRQIPQ PIKRHLPFSS MKPPFVPPED YHRFSTPAGA GTETVRIQDA 60 EAIVVKSPPI KRKSRTDNHE VSSTDWAASP GNTRTVSSPI CTPVSAKGGK AYGRSKVTKG 120 DMSGPSTPLS NAGSPAPLTP AGSCRYDSSL GLLTKKFINL IKHAEDGILD LNKAAETLEV 180 QKRRIYDITN VLEGIGLIEK KLKNRIHWKG LDASRPDEVE NDASILQAEV ENLSMEERRL 240 DDRIREMRER LRDLSEDEIN EKWLFVTEED IKTLPCFQVL FYCLVMRQCP FNVLNETLIA 300 IKAPHGTTLE VPDPDEAVDY PQRRYRIILR STMGPIDVYL VSQFEEKFED VNGGEPSMRY 360 ALASSSGSND NPAAETAVYE KTGLVVGELA EQDTRMAADL DASHDYAGGM MKIVPSEVGN 420 DADYWLLSDA GVSITDMWKS DAGVEWNGVN MLHDEFGMSD ISERPQTPPS GVVDMTYPAA 480 NATPR

Sequence ? help Back to Top

Protein Sequence Length: 485 aa Download sequence

MSTPQAPSRG AAAGGRQIPQ PIKRHLPFSS MKPPFVPPED YHRFSTPAGA GTETVRIQDA  60
EAIVVKSPPI KRKSRTDNHE VSSTDWAASP GNTRTVSSPI CTPVSAKGGK AYGRSKVTKG  120
DMSGPSTPLS NAGSPAPLTP AGSCRYDSSL GLLTKKFINL IKHAEDGILD LNKAAETLEV  180
QKRRIYDITN VLEGIGLIEK KLKNRIHWKG LDASRPDEVE NDASILQAEV ENLSMEERRL  240
DDRIREMRER LRDLSEDEIN EKWLFVTEED IKTLPCFQVL FYCLVMRQCP FNVLNETLIA  300
IKAPHGTTLE VPDPDEAVDY PQRRYRIILR STMGPIDVYL VSQFEEKFED VNGGEPSMRY  360
ALASSSGSND NPAAETAVYE KTGLVVGELA EQDTRMAADL DASHDYAGGM MKIVPSEVGN  420
DADYWLLSDA GVSITDMWKS DAGVEWNGVN MLHDEFGMSD ISERPQTPPS GVVDMTYPAA  480
NATPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-163	E2F/DP family protein