PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027069043.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 276aa MW: 30964.2 Da PI: 9.7417

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027069043.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	94	1.2e-29	34	88	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rl+Wt+eLH+ F +av+qLGG+++AtPk il++m+++gLt+ hvkSHLQkYR+ XP_027069043.1 34 KERLKWTQELHSLFEKAVNQLGGPDRATPKGILKAMGIPGLTIFHVKSHLQKYRM 88 68****************************************************8 PP
2	Myb_DNA-binding	54.6	2.5e-17	36	87	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e++ l+ +av+qlGg+ t+k I + mg g+t ++ks++qky+ XP_027069043.1 36 RLKWTQELHSLFEKAVNQLGGPdraTPKGILKAMGiPGLTIFHVKSHLQKYR 87 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MTIPRPEGRV AAHFYARETS EVNMGASRSD GSSKERLKWT QELHSLFEKA VNQLGGPDRA 60 TPKGILKAMG IPGLTIFHVK SHLQKYRMSK FIPESPNRGN RFERRSISEI LPNFSATSGA 120 QLNEALQMQK EVQKRLSDQL EVQRSLKMKI EAQGRFLERI ANEHKNRAAN AKPSKPYSPA 180 VSLPSLCEES DSEVDRNEIR PAVAAAAAEF RAPKRIRIED DDALLQKCNL ESYNTGHQSP 240 FLLRGLNSPC WAHEMGYPWG VATQSPMLPA LYDPLN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	9e-55	G2-like family protein