PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027068947.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family G2-like
Protein Properties Length: 318aa    MW: 34613.5 Da    PI: 7.0051
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027068947.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.61.8e-30112165155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  XP_027068947.1 112 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 165
                     59*******************.********************************8 PP
2Myb_DNA-binding48.12.8e-15114164148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+ WT+++++++vdav+ lG +   +ktI++ m   g+t++++ s++qky+
   XP_027068947.1 114 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 164
                      789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MREDDSNWFA KWEEELPSPE ELTPLSQTLI TPDLAIYFDI RNPNSPHHHH HHQQNPPPPP  60
PPPAPSQGQN TPSSQPNSSA EFDSSELGGT GGGSGGAGAG SGGEEPARTL KRPRLVWTPQ  120
LHKRFVDAVA HLGIKNAVPK TIMQLMSVDG LTRENVASHL QKYRLYLKRM QSISSGGGNG  180
GGVNGNASMA AAGSEPDLFA STPVPPHFLH PGRPNSDHFL PFVPMTMQHH HQMATVVGHH  240
HPHPQLQQQF RDFGTSPPNG QFEHRFLPRQ SQQQVQRMGT PVHGNTPVMP SYIEDLESAT  300
AASANGRKVL TLFPTGDD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10760.15e-79G2-like family protein