PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027068074.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | E2F/DP | ||||||||
Protein Properties | Length: 352aa MW: 38445.7 Da PI: 6.1902 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 87.1 | 1.3e-27 | 100 | 182 | 2 | 71 |
E2F_TDP 2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71 ++++Lr++++k ++ek+e+ g++t+neva+eLv+e d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg XP_027068074.1 100 TGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfadpnntisspdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 182 689********...*****999*******************************************************.*******98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 352 aa Download sequence |
MVNNNQEDGE RNHSALSRGG NGGGGGATRS WGTTVSGQSV STSGSVGSPS SRSEAAMATP 60 ASEGTFLKLN NLDIQGDDAG SQGTAGKKKR GQRAVGGDKT GRGLRQFSMK VCEKVESKGR 120 TTYNEVADEL VAEFADPNNT ISSPDQQQYD EKNIRRRVYD ALNVLMAMDI ISKDKKEIQW 180 KGLPRTSLND IEELKNERLG LRNRIEKKAA YLEELEEQYV GLQNLIQRNE QLYGSGNAPS 240 GGVALPFILV QTRPHATVEV EISEDMQLVH FDFNSTPFEL HDDNYVLKAM KFCERPQSDN 300 VPQNVSADGG ESSMANVFQP QVHQPSIPSI PARPPTSPPL PGILKARVKH EH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G03415.1 | 1e-144 | E2F/DP family protein |