PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027067445.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 380aa MW: 43668.5 Da PI: 6.1611

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027067445.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	117.5	1.3e-36	68	195	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka....eekewyfFskrdkkyatgkrknr.atksgyWkatgkdk 90 +p+G+rF Ptdeel+v+yL+k++++ +l+l + i+e+++y ++P++L +++k+ + + wyfF+ +ky++g+r++r + g+Wk tgkdk XP_027067445.1 68 MPRGYRFCPTDEELIVHYLRKRIAKAPLPL-NRIHEANVYGHNPQELTNRYKSdsfhNVNGWYFFTYLTNKYPKGSRPSRsCGDGGFWKPTGKDK 161 699*************************.77**********9655544454667****************666799***** PP NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +g++vg +k+L f g+kt W mheyr+ XP_027067445.1 162 KIYY-NGNTVGYRKSLDFLL---GPGQKTAWKMHEYRI 195 .999*******5...45688******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MDNHHQQREE QPYLLHDHLL HHHWPPLQGQ QQQPLQHQHQ PYLLDDQQQP VQQGIILHEN 60 SQNFLDSMPR GYRFCPTDEE LIVHYLRKRI AKAPLPLNRI HEANVYGHNP QELTNRYKSD 120 SFHNVNGWYF FTYLTNKYPK GSRPSRSCGD GGFWKPTGKD KKIYYNGNTV GYRKSLDFLL 180 GPGQKTAWKM HEYRIHANNP KSDPVLCRLY MNIKRKNKDE NEGDTEELMR ENLDQCLTVN 240 EAPMQNEDND LAAGSTNDQC MEYITSALDT GGDANSNQVI YDLSSFQFPH DLFQDFQGYT 300 NSHGGLEAIT QSTQEFTEPF HLSKGTMMPS NLSMEPVHLS GGTMIPSDFN MEDVWKYAIG 360 GTDLSNLAWQ NGCAGGYVSI

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MDNHHQQREE QPYLLHDHLL HHHWPPLQGQ QQQPLQHQHQ PYLLDDQQQP VQQGIILHEN  60
SQNFLDSMPR GYRFCPTDEE LIVHYLRKRI AKAPLPLNRI HEANVYGHNP QELTNRYKSD  120
SFHNVNGWYF FTYLTNKYPK GSRPSRSCGD GGFWKPTGKD KKIYYNGNTV GYRKSLDFLL  180
GPGQKTAWKM HEYRIHANNP KSDPVLCRLY MNIKRKNKDE NEGDTEELMR ENLDQCLTVN  240
EAPMQNEDND LAAGSTNDQC MEYITSALDT GGDANSNQVI YDLSSFQFPH DLFQDFQGYT  300
NSHGGLEAIT QSTQEFTEPF HLSKGTMMPS NLSMEPVHLS GGTMIPSDFN MEDVWKYAIG  360
GTDLSNLAWQ NGCAGGYVSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	4e-34	NAC family protein