PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027067305.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 349aa MW: 39826.4 Da PI: 7.3659

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027067305.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	118.1	8.6e-37	60	185	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 ppG+rF P d+el+v+yLkkk+ +++l+ + i++v++y + P L + + a+ ++wyfF++r+kk++ ++r+ r + sg+Wk tg+d ++ XP_027067305.1 60 PPGYRFCPCDSELIVDYLKKKILEEPLPR-NQIRDVNVYLHSPDILTeRYTPAGLRQWYFFTQREKKNECSSRQYREAGSGFWKVTGEDSAIQL- 152 9************************99.77**********8456667888**********************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 k+++vg kk +fy+g+ p g+kt+W+m+eyr+ XP_027067305.1 153 KDTVVGFKKAWIFYEGKLPVGRKTNWTMQEYRV 185 8899*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MDVDEQQQQQ QGIDQSYVNK CQEQVRPFLA ALDINPGDMD GNSQFTDQEG FEESYFDSFP 60 PGYRFCPCDS ELIVDYLKKK ILEEPLPRNQ IRDVNVYLHS PDILTERYTP AGLRQWYFFT 120 QREKKNECSS RQYREAGSGF WKVTGEDSAI QLKDTVVGFK KAWIFYEGKL PVGRKTNWTM 180 QEYRVNESPR QESASSTGTA LHDFVLCRIY KTKPENSNKS RRSQISQTQM RGQILEQPTQ 240 QGTVIYLQNG YNPIHPCIRT SSSRPVNYLG GMNSIGLPEN LRVSANSVTF TNQANRSGQL 300 IADGASTSTQ IRPMILSFPS RTDFMAERFQ QADGSQGNVQ TTLQNRHSA

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MDVDEQQQQQ QGIDQSYVNK CQEQVRPFLA ALDINPGDMD GNSQFTDQEG FEESYFDSFP  60
PGYRFCPCDS ELIVDYLKKK ILEEPLPRNQ IRDVNVYLHS PDILTERYTP AGLRQWYFFT  120
QREKKNECSS RQYREAGSGF WKVTGEDSAI QLKDTVVGFK KAWIFYEGKL PVGRKTNWTM  180
QEYRVNESPR QESASSTGTA LHDFVLCRIY KTKPENSNKS RRSQISQTQM RGQILEQPTQ  240
QGTVIYLQNG YNPIHPCIRT SSSRPVNYLG GMNSIGLPEN LRVSANSVTF TNQANRSGQL  300
IADGASTSTQ IRPMILSFPS RTDFMAERFQ QADGSQGNVQ TTLQNRHSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.2	8e-42	NAC family protein