PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027066545.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ARR-B | ||||||||
Protein Properties | Length: 562aa MW: 62791 Da PI: 7.486 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 78.5 | 8.2e-25 | 231 | 283 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+ WtpeLH++Fv av+qL G+ +A+Pk++lelm+ + Lt+ +v+SHLQkYR XP_027066545.1 231 KARVTWTPELHAKFVAAVQQL-GQ-EAVPKKVLELMNEPHLTRGNVASHLQKYRK 283 68*******************.65.5****************************6 PP | |||||||
2 | Myb_DNA-binding | 41.4 | 3.4e-13 | 233 | 282 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmg.kgRtlkqcksrwqkyl 48 r WT+e++ ++v av+qlG + +k++ + m+ ++t+ ++ s++qky+ XP_027066545.1 233 RVTWTPELHAKFVAAVQQLGQEaVPKKVLELMNePHLTRGNVASHLQKYR 282 679******************9***************************7 PP | |||||||
3 | Response_reg | 50 | 1.7e-17 | 25 | 146 | 1 | 108 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHH.HHHT.......TT....SEEEEEE.ST CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkei.reee.......pk....lpiivvt.ah 80 vl +dD+ + +++l+ l+k gy +v++++++ ea+e+l++++ +D++++D++ ++md ++ll+ i e + p+ ++ +++t a+ XP_027066545.1 25 VLAIDDNVVCLKVLAFELQKCGY-QVTATTKAAEAIEILRKNKdsYDIVITDVMRSDMDVFKLLEIIgLEMDipvisdePTsifsIRFVFMTsAN 118 7899*******************.***************888889**********************8777796665442277778889999789 PP TTHHHHHHHHHTTESEEEESS--HHHHH CS Response_reg 81 geeedalealkaGakdflsKpfdpeelv 108 ++ e +++ + Ga+d+l+Kp+ e l XP_027066545.1 119 NDLEVIEKGVMHGARDYLVKPVGLEILK 146 99*******************9988765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 562 aa Download sequence |
MFNAHLASQP SFQQRDNHFS QGLRVLAIDD NVVCLKVLAF ELQKCGYQVT ATTKAAEAIE 60 ILRKNKDSYD IVITDVMRSD MDVFKLLEII GLEMDIPVIS DEPTSIFSIR FVFMTSANND 120 LEVIEKGVMH GARDYLVKPV GLEILKNIWQ HVIRKTTYNP LPAQRIEANR AIRIPAQQIE 180 ANMASRVPAQ KMEADRAIRR SARVLHKKNH TVEDGQAVQP HDAPPLLEHK KARVTWTPEL 240 HAKFVAAVQQ LGQEAVPKKV LELMNEPHLT RGNVASHLQK YRKAALKQKE DARQQIEYHC 300 DANMRRHLDD ANIRASSSQN QRFHAVSHSN SSAAYGRYNL RSQNNPSLLT LNHQLSDLFL 360 QQNVGLVPSQ SRDMNHIQQQ VLTPTPLVTI CPDVQPEFNS IEYHPIQCRR NKNTIIDSER 420 VSLQIPLSGA IHTSASHHSS FLNTLRGKSI NEIATCPLAP GALINHIGNS NHDPKGQATS 480 LPGHHEARTY NGNGGTDSRG KAGTTGLVLD MQAQVDGLIG DEHINYMQFS DTDVHGHQRN 540 DSLDDELRSL VGQFAEDAAP TI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31920.1 | 2e-55 | ARR-B family protein |