PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027066038.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

HSF

Protein Properties

Length: 528aa MW: 59030.1 Da PI: 4.9117

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027066038.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	110.5	1.2e-34	138	229	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k++++++d++l+++isw ++g+sfvv+d+ efa+++Lp+ Fkh+nf+SFvRQLn+YgF+k++ ++ weF+ +sF +gk++ll++ XP_027066038.1 138 FLSKTFDLVDDPALDSIISWGASGQSFVVWDPVEFARRILPRNFKHNNFSSFVRQLNTYGFRKIDADK---------WEFASESFLRGKRHLLKN 223 9**************************************************************999.........************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+ks XP_027066038.1 224 IQRRKS 229 **97 PP

Sequence ? help Back to Top
Protein Sequence Length: 528 aa Download sequence
MSASTYIYSA YIPLSSFTEN PHQNLPSSFR NNFSKNSNPF FFFSFLVAQC IMNPHDRDEN 60 SVFPSSNSPS SSPPENQSSE VVPLSMVSPF VDLESRQHLQ EIVPGILSGG TITTEAARSF 120 PGMPQPMECL QGTPVPPFLS KTFDLVDDPA LDSIISWGAS GQSFVVWDPV EFARRILPRN 180 FKHNNFSSFV RQLNTYGFRK IDADKWEFAS ESFLRGKRHL LKNIQRRKSP HSHQLGGSSG 240 STGEAGKIVL EGEVEKLRKE RSLMMQEVFE LQEQQLGTIQ HVEAVNEKLQ AAERRQKLMV 300 SFMAKLFQNP DILDRLKQIK EQKQITSSRT MRKFLKHQPH EPGKAESFLE GQIVKYRTNF 360 RDLATPSAAP EFDPGAVEQL PEFTLQEPSG GGFSSQGTED TLLKGKTVVP PEVIPEYFVT 420 SPDDLAKEKN FPEYSSPDIE SMLKEQEPWS MDFEAGAGVS SSSNEIWGNA VNYEIPELMV 480 SSGLPDIWNL GSLPAAGSSG AEKWPDDESP FSKLDDQVGQ HKDESSNF

Sequence ? help Back to Top

Protein Sequence Length: 528 aa Download sequence

MSASTYIYSA YIPLSSFTEN PHQNLPSSFR NNFSKNSNPF FFFSFLVAQC IMNPHDRDEN  60
SVFPSSNSPS SSPPENQSSE VVPLSMVSPF VDLESRQHLQ EIVPGILSGG TITTEAARSF  120
PGMPQPMECL QGTPVPPFLS KTFDLVDDPA LDSIISWGAS GQSFVVWDPV EFARRILPRN  180
FKHNNFSSFV RQLNTYGFRK IDADKWEFAS ESFLRGKRHL LKNIQRRKSP HSHQLGGSSG  240
STGEAGKIVL EGEVEKLRKE RSLMMQEVFE LQEQQLGTIQ HVEAVNEKLQ AAERRQKLMV  300
SFMAKLFQNP DILDRLKQIK EQKQITSSRT MRKFLKHQPH EPGKAESFLE GQIVKYRTNF  360
RDLATPSAAP EFDPGAVEQL PEFTLQEPSG GGFSSQGTED TLLKGKTVVP PEVIPEYFVT  420
SPDDLAKEKN FPEYSSPDIE SMLKEQEPWS MDFEAGAGVS SSSNEIWGNA VNYEIPELMV  480
SSGLPDIWNL GSLPAAGSSG AEKWPDDESP FSKLDDQVGQ HKDESSNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03720.1	1e-103	HSF family protein