PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027065974.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | Nin-like | ||||||||
Protein Properties | Length: 423aa MW: 48360.6 Da PI: 6.7419 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 56.2 | 6.6e-18 | 262 | 310 | 4 | 52 |
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 i+ e+l+++ ++kdAAk L+v+ ++LKr+CR+y I+RWP+Rk +++ XP_027065974.1 262 GITREVLEQNSWRSLKDAAKVLQVSRSTLKRRCREYDIDRWPSRKARKV 310 6999*****************************************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 423 aa Download sequence |
MDVYAWTSGD NQMGQDWFVD EAELFEMPNL LVDMAVGLLV SPPRLGPVVS VESPEISDAY 60 SLWENDTRIP HQMRGFRLDG CGFGSSQVFA ADGAPKRGKI LNLILEDFFR TRELRERELV 120 LLKKGNKTCL TTRAQPFHYY SHQDFKKPCD VHGQQRGIVG SPIRPERTQG FINIPFPNLN 180 LAGVDVAHNS VSGIYEHKYG VVESPHRQEL LQNIENIAHD EGNMEIDVAN PERGGASIEP 240 RDSEVINIKR QKSSHTLKSK LGITREVLEQ NSWRSLKDAA KVLQVSRSTL KRRCREYDID 300 RWPSRKARKV NQAFAEQRVV QPSTENTEEQ HRPDTTRLGD DSSIWVKAEY QGYTMKFRLP 360 LSAHKFNLEE KVAQRLNLPT GSFKIEYQDE ENEWIWIACD EDLSTCMSTL SSLGRTTIKM 420 LVR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43500.1 | 1e-12 | Nin-like family protein |