PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027065759.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

HSF

Protein Properties

Length: 408aa MW: 46380.3 Da PI: 5.9011

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027065759.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.1	1.9e-35	75	167	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Flkk++e+++d+e++++isws++++sfvv+d+++f++++Lpk+Fkh+nf+SFvRQLn+Y F+k+++++ weF++++F+kgkk+ll++ XP_027065759.1 75 FLKKTFEMVDDPETDSTISWSSTNTSFVVWDPHKFSRDLLPKHFKHNNFSSFVRQLNTYRFRKTDSDR---------WEFANEEFQKGKKHLLKN 160 9*************************************************************9999.........************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 ikr+k++ XP_027065759.1 161 IKRRKQH 167 **986 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MDQLNVGFKR SVPVEEEDAP KVEKAEILPV KEEPVVFLDE DGPFGNVSSN FSGGGEFSDV 60 PKPLQGLHEV GPPPFLKKTF EMVDDPETDS TISWSSTNTS FVVWDPHKFS RDLLPKHFKH 120 NNFSSFVRQL NTYRFRKTDS DRWEFANEEF QKGKKHLLKN IKRRKQHSQM LQHQGAGQPW 180 LDSANYISET ELQKLRNDQN TLKLELLRLK QQQVNTENYL AAVKERLRTA ESKQKYMAIF 240 MVKAFKNPLF VQLFIEKMKQ KRALGSGEVS KKRRLAGPQG NENLTEAMNA ANNSLDATRK 300 AVDGKNLQPQ DELTTVDPEI QILFSPDHES SGPLQEQLVG ASSNTSENFI LWEKLMEDDM 360 IYENEPETGK SQSEIVLELE NLIAKPPSWG MNTKDLAGHA SYPAGLMA

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MDQLNVGFKR SVPVEEEDAP KVEKAEILPV KEEPVVFLDE DGPFGNVSSN FSGGGEFSDV  60
PKPLQGLHEV GPPPFLKKTF EMVDDPETDS TISWSSTNTS FVVWDPHKFS RDLLPKHFKH  120
NNFSSFVRQL NTYRFRKTDS DRWEFANEEF QKGKKHLLKN IKRRKQHSQM LQHQGAGQPW  180
LDSANYISET ELQKLRNDQN TLKLELLRLK QQQVNTENYL AAVKERLRTA ESKQKYMAIF  240
MVKAFKNPLF VQLFIEKMKQ KRALGSGEVS KKRRLAGPQG NENLTEAMNA ANNSLDATRK  300
AVDGKNLQPQ DELTTVDPEI QILFSPDHES SGPLQEQLVG ASSNTSENFI LWEKLMEDDM  360
IYENEPETGK SQSEIVLELE NLIAKPPSWG MNTKDLAGHA SYPAGLMA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	158	164	LKNIKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-71	HSF family protein