PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_027065746.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
|
||||||||
Family | NF-YB | ||||||||
Protein Properties | Length: 164aa MW: 17569.5 Da PI: 5.9771 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 187.5 | 9.8e-59 | 29 | 126 | 1 | 98 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqdrflPian+srimkk+lPan+ki+kdaketvqecvsefisf+tseasdkcqrekrktingddllwa+atlGfe+y++plkvyl++yre+eg XP_027065746.1 29 VREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEEYIDPLKVYLTRYREMEG 123 69********************************************************************************************* PP NF-YB 96 ekk 98 ++k XP_027065746.1 124 DTK 126 975 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 164 aa Download sequence |
MADSSQGGTP ASPGGGSHES GDQSPRSGVR EQDRFLPIAN ISRIMKKALP ANGKIAKDAK 60 ETVQECVSEF ISFITSEASD KCQREKRKTI NGDDLLWAMA TLGFEEYIDP LKVYLTRYRE 120 MEGDTKGSAK GADGSAKRDG VQLGPSPQGS FSQGMNYGSS QING |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G37060.1 | 5e-82 | NF-YB family protein |