PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027065407.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | NAC | ||||||||
Protein Properties | Length: 252aa MW: 28670.9 Da PI: 6.0394 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 143.9 | 9.1e-45 | 4 | 134 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 lppGfrF Pt+eel+++yL+ k+eg++ ++++vi+ vdiy+++P dLp+ +++++ ++w+fF++ + ++a+g r+nr t++gyWkatg+ XP_027065407.1 4 LPPGFRFYPTEEELISFYLHSKLEGRRQDIDTVIPVVDIYDHKPCDLPQfageCCRGDPEQWFFFIPMQDREARGGRPNRLTTEGYWKATGSPGC 98 79****************************999***************656766666888*********************************** PP NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyr 127 v+s++++ +g+k+t+vfykgrap+gekt+W m+ey+ XP_027065407.1 99 VYSSQNRIIGVKRTMVFYKGRAPNGEKTQWKMNEYK 134 ***********************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MENLPPGFRF YPTEEELISF YLHSKLEGRR QDIDTVIPVV DIYDHKPCDL PQFAGECCRG 60 DPEQWFFFIP MQDREARGGR PNRLTTEGYW KATGSPGCVY SSQNRIIGVK RTMVFYKGRA 120 PNGEKTQWKM NEYKAIDGEA SSAAPPKLRQ EMSLCRLYIG SKSLRAFDRR PPPPPGETSS 180 HHRQPHHQED QPATITSHQT HPPSLAAEIA SSTSGSGEDN FLASSSQGLE NESHDLAFNP 240 EPMWDWEQLN WF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 7e-83 | NAC family protein |