PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027064728.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 435aa MW: 47303.4 Da PI: 5.9337

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027064728.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	87.7	1.1e-27	157	211	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++WtpeLH+rFv+aveqL G +kA+P++ile+m++++Lt+++++SHLQkYR++ XP_027064728.1 157 KVKVDWTPELHRRFVQAVEQL-GVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSH 211 5689***************.******************************86 PP
2	Myb_DNA-binding	37.8	4.4e-12	160	209	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e++ ++v+av+qlG + +++I + mg +t+ ++ s++qky+ XP_027064728.1 160 VDWTPELHRRFVQAVEQLGVDkaVPSRILEIMGiDCLTRHNIASHLQKYR 209 57******************************889**********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MLAVSPLRTT KDERQDEMES FENGGGDDFP DFSCGNLLDS IDFDDLFVGI NDEDVLPDLE 60 MDPEILAEFS LSGGEESEIT TTSTSNEKME ENSAKEEVDK ANYSGPDASS GSTLTQTDDM 120 VTSKRDESVA ANPSAKEADK ARKSSTQSKA NPQGKRKVKV DWTPELHRRF VQAVEQLGVD 180 KAVPSRILEI MGIDCLTRHN IASHLQKYRS HRKHLLAREA EAANWTQRRQ MYGGAAAPAA 240 AGGKREMNHW IAPTMGFPPM APMPHFRPLH VWGHPSVDQS LMPVWPKHLG PSPPPPPVTW 300 APAAPAHPPT PPPDPCFWHS HHARVPNSLT PGTPCFPPHL APTRFPTPPV PGIPPPALYK 360 VDPGIAVPTA PAGQPVPQPP IDFHPSKESI DAAIGDVLSK PWQPLPLGLK PPSVDSVLVE 420 LHRQGISRIP PTACV

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MLAVSPLRTT KDERQDEMES FENGGGDDFP DFSCGNLLDS IDFDDLFVGI NDEDVLPDLE  60
MDPEILAEFS LSGGEESEIT TTSTSNEKME ENSAKEEVDK ANYSGPDASS GSTLTQTDDM  120
VTSKRDESVA ANPSAKEADK ARKSSTQSKA NPQGKRKVKV DWTPELHRRF VQAVEQLGVD  180
KAVPSRILEI MGIDCLTRHN IASHLQKYRS HRKHLLAREA EAANWTQRRQ MYGGAAAPAA  240
AGGKREMNHW IAPTMGFPPM APMPHFRPLH VWGHPSVDQS LMPVWPKHLG PSPPPPPVTW  300
APAAPAHPPT PPPDPCFWHS HHARVPNSLT PGTPCFPPHL APTRFPTPPV PGIPPPALYK  360
VDPGIAVPTA PAGQPVPQPP IDFHPSKESI DAAIGDVLSK PWQPLPLGLK PPSVDSVLVE  420
LHRQGISRIP PTACV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.1	5e-86	G2-like family protein