PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027064599.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MYB_related | ||||||||
Protein Properties | Length: 477aa MW: 53807.7 Da PI: 7.9542 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.1 | 4.1e-08 | 402 | 456 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqky 47 ++WT E+e l+++v+++ ++ W++I + Rt+ ++k++w++ XP_027064599.1 402 LPWTDAEEEMLKEGVEKFSTDrnkniPWRKILEFGRhvfdGSRTPVDLKDKWRNI 456 69******************************998899***************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 477 aa Download sequence |
MGWSEKDFCI KCDEGGNVLI CRDSRCPIVV HEKCLGFPAK FDEMGRFYCP YCVYRRAIEE 60 AHQAREKALS KKKALSKFLD TKMTNGDWQT QKTEISKRKE LSQLPGVDST GSLNSGCRPD 120 KINVHNHTAR LVEDQNEGRF APECSRLVLL SKETGESIRG DQNDVLCSNT GDIGGSSDCN 180 CRIVVVGHRT ESGPIVASGN ECVSSDREET IKRFEMVEIG NKVQLHSQWQ QDDLRGKVVE 240 DQLDDKNLRE SPAVENRGME NHLSPEAKRV GKDGDMLREY DGRLAGEEVE KEKVLESPAI 300 SPSHSALEMH LQEKRAGQTS DSICKDSNAA STGKASKQND KRKEENAEAT CFRKLSRNSA 360 SHHRASLDQF EKIHACGKLR KLNKPAPQCS MILCPNARRK SLPWTDAEEE MLKEGVEKFS 420 TDRNKNIPWR KILEFGRHVF DGSRTPVDLK DKWRNILGKV CWKVLQLPNA SQHINQQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58340.2 | 7e-06 | MYB_related family protein |