PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027064573.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family FAR1
Protein Properties Length: 305aa    MW: 35634.7 Da    PI: 6.7042
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027064573.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR129.72.1e-092163144
            FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreee 44
                    +fYn+Y+  +GFsvrk++ +k  ++g +t+r+++C k g + ++
  XP_027064573.1 21 NFYNRYGLVIGFSVRKDYLNKD-KDGVVTSRRYTCCKDGISLKQ 63
                    6*****************9998.8999***********987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MEEALCPKIG MEFQSEDEAY NFYNRYGLVI GFSVRKDYLN KDKDGVVTSR RYTCCKDGIS  60
LKQFHEFMGK EAGGLGNIGY THDDLKRYLR TKRERGLKYG EAGAMLRYFE EQKLKNPSFF  120
HAEQLNCEEQ ITNIFWADAS MLMDYTYFGD VVTFNTTYKT NKEYRPLSVF VGFNQFRQLV  180
IFGATLLYDE TIESFKWVFG TFVEAVCGRH PKTIFTDQDA AMAAAISAVM PSTYHGLCTF  240
HIRVNFMKHL GNYYKDGSNL PYRFVECMYE IEDENKFIMA WDAMLKEHKL ETNEWLCGIY  300
ACRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.12e-47FAR1 family protein