PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027063959.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

HB-other

Protein Properties

Length: 1787aa MW: 200262 Da PI: 5.3827

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027063959.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.9	2.1e-19	53	108	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR t++qle+Le+++ + yps+++r+eLA+klgLt+rq ++WF+ rR k++k XP_027063959.1 53 VKRKMKTPSQLEVLEKAYSVDTYPSEAMRAELAMKLGLTDRQLQMWFCHRRLKDRK 108 58999*************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1787 aa Download sequence
MFFRKDLILM EKVEVDGGGS GGSAAAAAAD AGAEGGGYDV VKKNSTPEGE PRVKRKMKTP 60 SQLEVLEKAY SVDTYPSEAM RAELAMKLGL TDRQLQMWFC HRRLKDRKPP GEKRVKKEAS 120 PGMVGALSNG VGKELVGGYG GGMKNDQSLG LVRTALGPTE ILQQHRVVHR SGTALARIGT 180 EMPAVKRYYE PPQALSELRA IAFVEAQLGE RLREDGPVLG MEFDPLPPGA FGSPIGLQKP 240 GVGLYEAQVY ETPDAKVIQG AKRTIHEYQF LPEQPSIRDD IRERALPFQY YGSSTDAQSS 300 RTTLSAGRSF MHGTEQLTPG YSFQGKLSGG PCLSLLPQLG NQGHHLSPPS GEVDIFPQRN 360 SVLNIDIDRP GAHLTRGLET PLIPTEKRVI HDEERLERKR KSEEARIARE VEAHEKRIRK 420 ELEKQDLLRR KRDEQLRKEM ERQDKERRKE EERLLREKQR EEERYQREQR REMERREKFL 480 QKESIRAEKM RLKLEMRRER EAARLKAATE RATARRIAKE SVELIDDERL ELLELAASSQ 540 GLPSTLALDN EALQNLESHR DSLTEFPPKT VCLKRPFGMQ PWVESEESVG SILMIWRFLI 600 TFADVLGLWP FTLDEIVQAF HDYDSRLLGE IHIALLRIII RDIEDIARTP ATAVGANQNA 660 AIPGGGHPQI VEGAYSWGFD ILSWHQHLNP LTWPEILRQF ALAAGFGPKL KRRNVEQSHP 720 HDENEGKDGI DIIAGLRNGA AAENAVAKMR QRGISNLGRS RHRLTPGTVK YAAFHVLSLE 780 GSKGLTILEA VDKIQNSGLR DLTTSKTPEA SVAAALSRDT KLFERTAPST YCVRAPYRKD 840 PADADAILAT ARERIFAYKN EFLDAEEPDE AEKEDAERDE DSESDMADDP DINDLDTERN 900 LNKESLHSFE PSTSGVKHHS GNIKEKSHVQ FTESSGSSIA NTNGSFDIVQ PEGMEGASGS 960 QSAATVGIHI EAANKEDNVI DESSTVELWV QGLTEGDYSD LSVEERLDAL VALIGVANEG 1020 NSIRVVLEER LEAANALKKQ MWAEAQLDKR RVKEEYALKV QSSSFAGSRS EQNSSITSSD 1080 GRQSTFLNID GRNESLSTNP KNHQMDLGDS SRIPNSSAST TAERNMMLQE FSGPDVLLQQ 1140 SAYAAEKSRL EMKAYIGQKA EEIYVYKSVP LGQDRRRNRY WQFIASPSQN DPGSGRIFVE 1200 LHDGRWRLID SAEGFDGLLA SLDVRGTRES HLHSMLQRIE VSFRETAKKN LCSRSTSQDA 1260 DDVKEEVYEE SPNSMVPDMM EPLASIRIKC ESYGLDKNVT LERYRDFEKW MWDECFSIMK 1320 LRALKYGKTL RTRLLSICSH CHDLYFFENQ HCPFCHKNCS ILVGTFNFGE HVSYCKEKQE 1380 EVQNRTLVKL EPSSPLRIRL LKAQLASLEA SLLPEAVKAF WSEDYRRSWG MKLEIASSAE 1440 DLLQILSLLE NAVKRDFLGP DYETANELLG FENLKGGMVD NTPTLEMTAV PPWIPQTTSA 1500 VALRLMDLDT SICYTLQQKD DSEKVKGARH IIRIPTRNTG ATNAAENVRT ERPQEAGTVP 1560 EDTWDGPGAK LNSSRRAHRQ VARPQRRVSE SRNGSRQGTS AAKRDKFGPL LGWKGRPNGR 1620 GGRKRGRRTV RSRQNPTKKR TDIASKRASA GADIYDKTPS SYQHEWDEEG TTQIQAEVAG 1680 NESSSERSGF DDDNDLMVED YSGCFGTKSE NLAKVIDYGM GVENGNDELD DDDEEDDEEE 1740 ADERPGEQVV EEYFDSDSEE DANITVSGEK MGNLNKGSEF SSSDYSD

Sequence ? help Back to Top

Protein Sequence Length: 1787 aa Download sequence

MFFRKDLILM EKVEVDGGGS GGSAAAAAAD AGAEGGGYDV VKKNSTPEGE PRVKRKMKTP  60
SQLEVLEKAY SVDTYPSEAM RAELAMKLGL TDRQLQMWFC HRRLKDRKPP GEKRVKKEAS  120
PGMVGALSNG VGKELVGGYG GGMKNDQSLG LVRTALGPTE ILQQHRVVHR SGTALARIGT  180
EMPAVKRYYE PPQALSELRA IAFVEAQLGE RLREDGPVLG MEFDPLPPGA FGSPIGLQKP  240
GVGLYEAQVY ETPDAKVIQG AKRTIHEYQF LPEQPSIRDD IRERALPFQY YGSSTDAQSS  300
RTTLSAGRSF MHGTEQLTPG YSFQGKLSGG PCLSLLPQLG NQGHHLSPPS GEVDIFPQRN  360
SVLNIDIDRP GAHLTRGLET PLIPTEKRVI HDEERLERKR KSEEARIARE VEAHEKRIRK  420
ELEKQDLLRR KRDEQLRKEM ERQDKERRKE EERLLREKQR EEERYQREQR REMERREKFL  480
QKESIRAEKM RLKLEMRRER EAARLKAATE RATARRIAKE SVELIDDERL ELLELAASSQ  540
GLPSTLALDN EALQNLESHR DSLTEFPPKT VCLKRPFGMQ PWVESEESVG SILMIWRFLI  600
TFADVLGLWP FTLDEIVQAF HDYDSRLLGE IHIALLRIII RDIEDIARTP ATAVGANQNA  660
AIPGGGHPQI VEGAYSWGFD ILSWHQHLNP LTWPEILRQF ALAAGFGPKL KRRNVEQSHP  720
HDENEGKDGI DIIAGLRNGA AAENAVAKMR QRGISNLGRS RHRLTPGTVK YAAFHVLSLE  780
GSKGLTILEA VDKIQNSGLR DLTTSKTPEA SVAAALSRDT KLFERTAPST YCVRAPYRKD  840
PADADAILAT ARERIFAYKN EFLDAEEPDE AEKEDAERDE DSESDMADDP DINDLDTERN  900
LNKESLHSFE PSTSGVKHHS GNIKEKSHVQ FTESSGSSIA NTNGSFDIVQ PEGMEGASGS  960
QSAATVGIHI EAANKEDNVI DESSTVELWV QGLTEGDYSD LSVEERLDAL VALIGVANEG  1020
NSIRVVLEER LEAANALKKQ MWAEAQLDKR RVKEEYALKV QSSSFAGSRS EQNSSITSSD  1080
GRQSTFLNID GRNESLSTNP KNHQMDLGDS SRIPNSSAST TAERNMMLQE FSGPDVLLQQ  1140
SAYAAEKSRL EMKAYIGQKA EEIYVYKSVP LGQDRRRNRY WQFIASPSQN DPGSGRIFVE  1200
LHDGRWRLID SAEGFDGLLA SLDVRGTRES HLHSMLQRIE VSFRETAKKN LCSRSTSQDA  1260
DDVKEEVYEE SPNSMVPDMM EPLASIRIKC ESYGLDKNVT LERYRDFEKW MWDECFSIMK  1320
LRALKYGKTL RTRLLSICSH CHDLYFFENQ HCPFCHKNCS ILVGTFNFGE HVSYCKEKQE  1380
EVQNRTLVKL EPSSPLRIRL LKAQLASLEA SLLPEAVKAF WSEDYRRSWG MKLEIASSAE  1440
DLLQILSLLE NAVKRDFLGP DYETANELLG FENLKGGMVD NTPTLEMTAV PPWIPQTTSA  1500
VALRLMDLDT SICYTLQQKD DSEKVKGARH IIRIPTRNTG ATNAAENVRT ERPQEAGTVP  1560
EDTWDGPGAK LNSSRRAHRQ VARPQRRVSE SRNGSRQGTS AAKRDKFGPL LGWKGRPNGR  1620
GGRKRGRRTV RSRQNPTKKR TDIASKRASA GADIYDKTPS SYQHEWDEEG TTQIQAEVAG  1680
NESSSERSGF DDDNDLMVED YSGCFGTKSE NLAKVIDYGM GVENGNDELD DDDEEDDEEE  1740
ADERPGEQVV EEYFDSDSEE DANITVSGEK MGNLNKGSEF SSSDYSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44180.1	0.0	HB-other family protein