PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027063418.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

NAC

Protein Properties

Length: 355aa MW: 39590.2 Da PI: 8.7301

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027063418.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170	7.4e-53	14	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrF Ptdeel+v+yL++kv+g++++l ++i e+d+yk++PwdLp+k+ +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk +++ XP_027063418.1 14 LPPGFRFYPTDEELLVQYLCRKVAGHDFNL-QIIGEIDLYKFDPWDLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITT- 106 79**************************.89***********7777799*********************************99. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +g++vg+kk Lvfy g+apkg+kt+W+mheyrl XP_027063418.1 107 EGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRL 139 999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 355 aa Download sequence
MGVRETDPLS QLSLPPGFRF YPTDEELLVQ YLCRKVAGHD FNLQIIGEID LYKFDPWDLP 60 SKAIFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKVITTEGRK VGIKKALVFY 120 VGKAPKGTKT NWIMHEYRLS EPQRKNGSAR LDDWVLCRIY KKNSSAGAKP VSGLQSREHS 180 HGSSTSSSSQ FDDVLESLPE ISDRFFALPR MNSLKNLHQD DQKINIQNLG SGSFDWATLA 240 GLNSLPELGP GSQAQAIPAA AAHGHVNSNV ASCNNNDRNN NVNAQNDMYV PSFPQAGHVD 300 EEVQSGLRSH RVENSSFFQH NASPLVPHTH SFHNSVDPFG IRYPPTQTGI MGFRP

Sequence ? help Back to Top

Protein Sequence Length: 355 aa Download sequence

MGVRETDPLS QLSLPPGFRF YPTDEELLVQ YLCRKVAGHD FNLQIIGEID LYKFDPWDLP  60
SKAIFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKVITTEGRK VGIKKALVFY  120
VGKAPKGTKT NWIMHEYRLS EPQRKNGSAR LDDWVLCRIY KKNSSAGAKP VSGLQSREHS  180
HGSSTSSSSQ FDDVLESLPE ISDRFFALPR MNSLKNLHQD DQKINIQNLG SGSFDWATLA  240
GLNSLPELGP GSQAQAIPAA AAHGHVNSNV ASCNNNDRNN NVNAQNDMYV PSFPQAGHVD  300
EEVQSGLRSH RVENSSFFQH NASPLVPHTH SFHNSVDPFG IRYPPTQTGI MGFRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27410.2	1e-128	NAC family protein