PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027063385.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | ERF | ||||||||
Protein Properties | Length: 220aa MW: 23493.2 Da PI: 8.836 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 66.6 | 4.9e-21 | 24 | 73 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr ++ +gr++AeIrdps+ + r++lg+f+taeeAa+a++aa+++++g XP_027063385.1 24 HFRGVRKRP-WGRYAAEIRDPSK---KSRVWLGTFDTAEEAARAYDAAAREFRG 73 69*******.**********965...6*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MAMKEKSKDV KPSTGKANAV KEVHFRGVRK RPWGRYAAEI RDPSKKSRVW LGTFDTAEEA 60 ARAYDAAARE FRGPKAKTNF PSPSEIQSPS NSSTVESSSG DGSTHAPVEL DLTRRLGVAA 120 GGGGAGSEIP ILHHPQAMAV LPNGQPVVFF QPMALNRADY PYRFGPVAMD YANVVGRGRG 180 AVHSDSDSSS VVDDNISDGD NMKRGGGLDL DLNFPPPVEA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 2e-22 | ERF family protein |