PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027063336.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family NAC
Protein Properties Length: 303aa    MW: 34266.4 Da    PI: 8.9859
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027063336.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM158.92.1e-49191482128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                      pGfrFhPtdeelv +yL++kve+k+l++ e i++vdiyk++PwdLp  kv   ++ke yfF+ r +ky+++ r+nr+t sg+Wkatg dk+++s
  XP_027063336.1  19 LPGFRFHPTDEELVGFYLRRKVERKPLRI-ELITQVDIYKCDPWDLPlPKVGVvGDKEFYFFCMRGRKYRNSVRPNRVTGSGFWKATGIDKPIYS 112
                     69***************************.89**************95343333899************************************** PP

             NAM  95 k..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +  +++ +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  XP_027063336.1 113 SgeTTQCIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 148
                     8555566***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MEEFKSSNKN HKDDDGVVLP GFRFHPTDEE LVGFYLRRKV ERKPLRIELI TQVDIYKCDP  60
WDLPLPKVGV VGDKEFYFFC MRGRKYRNSV RPNRVTGSGF WKATGIDKPI YSSGETTQCI  120
GLKKSLVYYR GSAGKGTKTD WMMHEFRLPP GWTHSTSTQP NPRNNIAQET DDWTLCRIFK  180
RNASSKRYKP DLKHACTKGG SGAASSKPCS LQSQNSCHPY TTLEDVGFQQ RTNAAAGIDV  240
NHSSQFLAAQ EQILLVAQTS YSSSSSNFWN LNGDEFFRDG RWDELSSVVD SAADMSNPFA  300
RSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.11e-89NAC family protein