PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_027063030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
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Family | MYB | ||||||||
Protein Properties | Length: 160aa MW: 18062.7 Da PI: 8.0825 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 32.1 | 2.6e-10 | 8 | 50 | 6 | 48 |
HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +eEd +l +v ++G gt ++ ++ g+ R++k+c++rw +yl XP_027063030.1 8 KEEDNKLRAYVLRYGIGTXAALPKFAGLSRCGKSCRLRWMNYL 50 69***************************************97 PP | |||||||
2 | Myb_DNA-binding | 54.5 | 2.8e-17 | 56 | 101 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T eE++l++ +++q+G++ W++Ia++++ Rt++++k++w+++l XP_027063030.1 56 RGKYTIEEEDLIIXLHEQYGNR-WSAIAAKLP-ARTDNDIKNHWHTHL 101 899*******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence |
MGKGHGVKEE DNKLRAYVLR YGIGTXAALP KFAGLSRCGK SCRLRWMNYL KPGVRRGKYT 60 IEEEDLIIXL HEQYGNRWSA IAAKLPARTD NDIKNHWHTH LKKRYKESPI CEGSQHIDDA 120 DQNEQSSAMF TSGSSTDQKT EVDPTTSASD SLDAYTDISF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 1e-41 | MYB family protein |