PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027062984.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

FAR1

Protein Properties

Length: 692aa MW: 80002.6 Da PI: 7.4117

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027062984.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	79.5	6e-25	68	156	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YAk GF +r sk +k k+++ + +r f+Cs+egk+ ++k++ + +r+etr++C a++k++ ++ gk++v +++ eHnHel+ XP_027062984.1 68 NFYQKYAKASGFGTRLSKGHKDKNSDLMLDRIFCCSREGKKPKDKRN-MIVKYPRPETRCDCSARMKISCRQGGKYRVVQFVAEHNHELS 156 6****************************************9999.99999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 692 aa Download sequence
MHVAVTSMQI SFCFSFPMVY DTEINENALP LCITDGNQGN QIFLPLAIPD DLVPKLGMEF 60 DTEVAAKNFY QKYAKASGFG TRLSKGHKDK NSDLMLDRIF CCSREGKKPK DKRNMIVKYP 120 RPETRCDCSA RMKISCRQGG KYRVVQFVAE HNHELSTPSK THLFRSHRQV TMAHEAEIDM 180 ARSCGITPKQ SIELMSKQVG GRENLGFIRD DLKNYLRSKR SIPMMQGDTG GVLEYLQGMQ 240 LEDPNFFYAI QVDEDDLITN IFWADAKMRT DFAHFGDVVC FDTTYRKHKD GRPIALFVGV 300 NHHKQTTVFG AALLYDETIG TFEWLFDTFA KAMMGKIPRT ILTDQDGRMA TALASQWPTT 360 YHRLCIWHIY QNAATHLADV FKDFQNFVAD FSHCIYDYEN ENDFFEGWSE MLKKYGLEDN 420 KWLKKMFDIK EKWALVYGRE TFYVDMTTTQ RSESMNSVIK KYVSYKHDLL EFFEHFQRLL 480 DDRRYDESVA DFRGNQSTPA MTFPCKILQH AASIYTHEVY EKFKEELCKG IDCKWEIDGE 540 LGNQLIYKVT PYGKTSHHLV TYGSSMNSIS CSCKKFEFAG FLCSHALKIL MTLNIVTIPD 600 AYILKRWTKA AKTGNVHVSS ESSPEMELKA KLSFRYKELS YLYMQLMTKA SECDEAYQIA 660 KDGFWKMSEQ MDACCLSLII SGIWNSNRRH LQ

Sequence ? help Back to Top

Protein Sequence Length: 692 aa Download sequence

MHVAVTSMQI SFCFSFPMVY DTEINENALP LCITDGNQGN QIFLPLAIPD DLVPKLGMEF  60
DTEVAAKNFY QKYAKASGFG TRLSKGHKDK NSDLMLDRIF CCSREGKKPK DKRNMIVKYP  120
RPETRCDCSA RMKISCRQGG KYRVVQFVAE HNHELSTPSK THLFRSHRQV TMAHEAEIDM  180
ARSCGITPKQ SIELMSKQVG GRENLGFIRD DLKNYLRSKR SIPMMQGDTG GVLEYLQGMQ  240
LEDPNFFYAI QVDEDDLITN IFWADAKMRT DFAHFGDVVC FDTTYRKHKD GRPIALFVGV  300
NHHKQTTVFG AALLYDETIG TFEWLFDTFA KAMMGKIPRT ILTDQDGRMA TALASQWPTT  360
YHRLCIWHIY QNAATHLADV FKDFQNFVAD FSHCIYDYEN ENDFFEGWSE MLKKYGLEDN  420
KWLKKMFDIK EKWALVYGRE TFYVDMTTTQ RSESMNSVIK KYVSYKHDLL EFFEHFQRLL  480
DDRRYDESVA DFRGNQSTPA MTFPCKILQH AASIYTHEVY EKFKEELCKG IDCKWEIDGE  540
LGNQLIYKVT PYGKTSHHLV TYGSSMNSIS CSCKKFEFAG FLCSHALKIL MTLNIVTIPD  600
AYILKRWTKA AKTGNVHVSS ESSPEMELKA KLSFRYKELS YLYMQLMTKA SECDEAYQIA  660
KDGFWKMSEQ MDACCLSLII SGIWNSNRRH LQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-138	FAR1 family protein