PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_027062735.1

Organism

Coffea arabica

Taxonomic ID

13443

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea

Family

G2-like

Protein Properties

Length: 226aa MW: 25618.8 Da PI: 8.5188

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_027062735.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	84.3	1.3e-26	26	80	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWt LH++Fv+av++LGG+ +AtPk+i+ m+++ ++ +h+kSHLQkYRl XP_027062735.1 26 KPRIRWTAGLHNCFVKAVDRLGGPFEATPKEIMMQMDIPEVAASHIKSHLQKYRL 80 79****************************************************8 PP
2	Myb_DNA-binding	35.3	2.6e-11	30	79	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT+ ++ +v+av +lGg+ t+k I+ m + ++ks++qky+ XP_027062735.1 30 RWTAGLHNCFVKAVDRLGGPfeaTPKEIMMQMDiPEVAASHIKSHLQKYR 79 9*******************************66689********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence
MAAKGNDTKK LHTSDRQLQV AENTRKPRIR WTAGLHNCFV KAVDRLGGPF EATPKEIMMQ 60 MDIPEVAASH IKSHLQKYRL RMGCNIGTAA DSTVARKAAT NTMIEADDSI SPAGWHTNEA 120 IQMMQAQRAK FEGKRKICKE EKNLDNVEQH QVQCTGDKNF HTSTGHQRGK GKKRAEDEDV 180 FHLERQNGQE KQSDHHHQRP LFNLNAPALD EHEPGRDCEI SFHQPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	3e-20	G2-like family protein