PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_027062466.1
Organism
Coffea arabica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Gardenieae complex; Bertiereae - Coffeeae clade; Coffeeae; Coffea
Family BES1
Protein Properties Length: 291aa    MW: 30874.4 Da    PI: 7.2755
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_027062466.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822332e-104311669149
          DUF822  69 yrkgskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsss 149
                     y  g++p ++++++g s+sasp+ss++        +sp +sy++sp+sssfpsp+s+  + + +   +sl+p+l++ls++sss
  XP_027062466.1  43 YG-GCRPVDRMDIMGGSTSASPCSSYH--------PSPGTSYNPSPASSSFPSPASSPYAANINGdgNSLIPWLKNLSSSSSS 116
                     55.99**********************........*******************9987665544456**********997776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    
MASCLPPHLQ LPWRQAHFSG FVFGPLERLF LSLPRHHSFF STYGGCRPVD RMDIMGGSTS  60
ASPCSSYHPS PGTSYNPSPA SSSFPSPASS PYAANINGDG NSLIPWLKNL SSSSSSTSST  120
KFQLLCHGGS ISAPVTPPLS SPTARTPRLK TDWDDSSARA SWGSHSSFLP LSTPPSPGRQ  180
APPDSEWFAG MQIPQGGPTS PTFSLVSANP FAFKFESLRH TGSHMCTPGQ SGTCSPAIPA  240
GSDVPMAEVI SDEFAFRSIK GGLVKPWEGE RIHEDCGSDD LELTLGSSKT R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-69BES1 family protein