PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026451179.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MYB | ||||||||
Protein Properties | Length: 266aa MW: 29897.1 Da PI: 7.3621 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.2 | 7e-17 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd l+d+++++G+g +W + +++ g++R++k+c++rw++yl XP_026451179.1 14 RGPWSPEEDTTLKDYIRRHGTGsNWISLPQKAGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 38.5 | 2.6e-12 | 71 | 111 | 4 | 46 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++eEd ++ + k G++ W+ Ia+ ++ gRt++++k++w++ XP_026451179.1 71 YSEEEDNIICTLYKNIGSR-WSIIASQLP-GRTDNDVKNYWNT 111 69*****************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 266 aa Download sequence |
MGRAPCCDKA SVKRGPWSPE EDTTLKDYIR RHGTGSNWIS LPQKAGLKRC GKSCRLRWLN 60 YLRPDIKHGG YSEEEDNIIC TLYKNIGSRW SIIASQLPGR TDNDVKNYWN TKLKKKFMAP 120 ATTTPPKPNY LLNTNNQIRQ QLTSSVSLSP SLTSPPPLTN LYASIPVMDN HVRVSDFSYS 180 PAELDFGSEN QKQDSNPIYE IESSSTSQAI SNHYYPNCYY FTSSTTWSSD NATIDNGSGG 240 GGEEYDSLFK EFGFDPSSSS DYFWIA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 6e-73 | MYB family protein |