PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026445999.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 384aa MW: 41546.1 Da PI: 8.5061

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026445999.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	62.9	6.5e-20	20	65	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l ++v+++G+++W++I++ ++ gR++k+c++rw + XP_026445999.1 20 KGPWSPEEDESLTKLVQKHGPRNWSLISKSIP-GRSGKSCRLRWCNQ 65 79****************************.*********985 PP
2	Myb_DNA-binding	51.6	2.1e-16	74	116	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++T eEd+ +++a++++G++ W+tIar + gRt++ +k++w++ XP_026445999.1 74 AFTSEEDDTIIRAHAKFGNK-WATIARLLT-GRTDNAIKNHWNST 116 79****************.****9.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MASSSWFSKR DINNNQDRIK GPWSPEEDES LTKLVQKHGP RNWSLISKSI PGRSGKSCRL 60 RWCNQLSPQV EHRAFTSEED DTIIRAHAKF GNKWATIARL LTGRTDNAIK NHWNSTLKRK 120 CSSMLDDGSG SDGGGGGCNE EPPLKRSVSL DAAQPNFSGG GIFFNNNNNN NPGSPCGSDL 180 SDSSLPPATQ LSSSHIFRPV ARAGAGVVSP MQTTSNSISS TMNDPPTSLS LSLPGSDSSC 240 DGFNHISGST HSRMNGSDSS NDGFNHVKVN PTNQQLQIVI PSPPSPAPQV QLQQSTTPLP 300 PPTPTPVQPN QFTEMRSPSV RNQDIEKPFP HFNSEFLSVM QEMIKKEVRS YMSGLEQSGG 360 FCFQGGDGGI RNVAVKRIGV SKIE

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MASSSWFSKR DINNNQDRIK GPWSPEEDES LTKLVQKHGP RNWSLISKSI PGRSGKSCRL  60
RWCNQLSPQV EHRAFTSEED DTIIRAHAKF GNKWATIARL LTGRTDNAIK NHWNSTLKRK  120
CSSMLDDGSG SDGGGGGCNE EPPLKRSVSL DAAQPNFSGG GIFFNNNNNN NPGSPCGSDL  180
SDSSLPPATQ LSSSHIFRPV ARAGAGVVSP MQTTSNSISS TMNDPPTSLS LSLPGSDSSC  240
DGFNHISGST HSRMNGSDSS NDGFNHVKVN PTNQQLQIVI PSPPSPAPQV QLQQSTTPLP  300
PPTPTPVQPN QFTEMRSPSV RNQDIEKPFP HFNSEFLSVM QEMIKKEVRS YMSGLEQSGG  360
FCFQGGDGGI RNVAVKRIGV SKIE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23290.1	2e-70	MYB family protein