PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026442258.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | MYB | ||||||||
Protein Properties | Length: 400aa MW: 45337.8 Da PI: 5.8254 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 45.7 | 1.5e-14 | 14 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd l+ ++ q G+g +W + ++++g++R++k+c++rw++yl XP_026442258.1 14 KGPWSPEEDATLKSYIDQKGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP | |||||||
2 | Myb_DNA-binding | 37.7 | 4.6e-12 | 69 | 111 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ ++ G++ W+ Ia+ ++ gRt++++k++w++ XP_026442258.1 69 GGFSEEEDTIICNLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 400 aa Download sequence |
MGRAPCCDKA NVKKGPWSPE EDATLKSYID QKGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDTIIC NLYISIGSRW SIIAAQLPGR TDNDIKNYWN TKLKRKLLGR 120 RKDSQARRLS SSLDKDLKDS NDEDNSYANT LSNSALERLQ LHMQFQNPQN PLSFYNNPVL 180 WPKLHPLGEK IFQDHQHGSN MMNINPTAES SPFIQKKPNS QDGIASHQST TFYELSISSA 240 ELERDDSATR NPNNGNDYLG YSFEGFSSFN GANNVVDENI MNWKSNGGVE QLNTDNFQSS 300 VFGLQAELTE LLNHNKTSGF EVNENHHSRK NSTISETDYW FKEMDVNSSK DSKSWWTGTT 360 TDFDTISSSS NSWDNSASAY HSTANDDQGM FQEYVLEYDL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 2e-93 | MYB family protein |