PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026422369.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 501aa MW: 55156.4 Da PI: 6.7003 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 40.4 | 6.8e-13 | 23 | 67 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT++Ed++l + + G+++W+ Ia+++ +t qc+ rw++yl XP_026422369.1 23 TWTQQEDDILREQISINGTENWAIIANKFK-DKTTRQCRRRWYTYL 67 6****************************9.*************97 PP | |||||||
2 | Myb_DNA-binding | 41.2 | 3.7e-13 | 73 | 116 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd l +a k +G++ W+ Ia+ + gRt++ +k+r+ + XP_026422369.1 73 KGGWSPEEDMVLCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFTT 116 688*******************.*********.**********976 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 501 aa Download sequence |
MKHQETRNLK SESAKQKERH IVTWTQQEDD ILREQISING TENWAIIANK FKDKTTRQCR 60 RRWYTYLNSD FKKGGWSPEE DMVLCEAQKI FGNRWTEIAK VVSGRTDNAV KNRFTTLCKK 120 RAKHETILKE NKSLCTNPNN KRVLFQNGLV TDGTSESTAP LKKMRTNISD VAENCDHEGR 180 LLGLCGTTDA QQLRPPFAVI FPKSHGVDNL PTQQHVSNTI SVTSTDGKSN GQATFLKRND 240 PRITVLMQQA ELLSSLAAKV NSEGNNQSLD NAWKELQDFL NRNHKSNQLQ SELPDTDFHL 300 EGLKELIEDL RSNTFGGHLH WRQQDLHEES SGSSGNSTES TLQSSAGEKI ELPQGEVCSL 360 YQATGVEPQS ITLLESDGTG GEDGFLCSGV ANVGAGNNAD AGGSEEFHTG TVVTQVGLLA 420 SSAEPKGTDQ LVPAMSNAEF SSPVKVTPLF RSFGAAIPTP LFSESERNFL LKTFGSASSP 480 PNPSSNHSQP PPCKRSLLQS L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G02820.2 | 1e-147 | MYB family protein |