PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026418876.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 368aa MW: 41200.6 Da PI: 7.791

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026418876.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.6	1.1e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+++++++G+g +W + +++ g++R++k+c++rw++yl XP_026418876.1 14 KGPWSPEEDTKLKEYIEKYGTGgNWIALPQKAGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	36.7	9.9e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g ++ Ed ++ ++++ G++ W+ Ia+ ++ gRt++++k++w++ XP_026418876.1 69 GEFSDAEDRIICNLFATIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 789****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDTKLKEYIE KYGTGGNWIA LPQKAGLKRC GKSCRLRWLN 60 YLRPNLKHGE FSDAEDRIIC NLFATIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKIMGA 120 VTTTNNPSLV THRSKPPNPN NFLSSALHQT PTTPMSSSIF HGGNNCFYDS TTQTRSFMDL 180 LDESINPRSN PMNNINHTTS TSVVQSNYHC QDQGLMGTIH NNLLMFGTSG TNEQLSCSSS 240 DGSCSNHISY GNNKEYENGN NHVNVTTSRS IGTAKNGEMM MENYYYTGGE SVEEENQKFI 300 FGNDHHGFNG WSTSTTTHHQ KQNGLIWEDN HELGFGSEQM KQLIVSNNNN SSVFSSDENK 360 TQGKVMYF

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDTKLKEYIE KYGTGGNWIA LPQKAGLKRC GKSCRLRWLN  60
YLRPNLKHGE FSDAEDRIIC NLFATIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKIMGA  120
VTTTNNPSLV THRSKPPNPN NFLSSALHQT PTTPMSSSIF HGGNNCFYDS TTQTRSFMDL  180
LDESINPRSN PMNNINHTTS TSVVQSNYHC QDQGLMGTIH NNLLMFGTSG TNEQLSCSSS  240
DGSCSNHISY GNNKEYENGN NHVNVTTSRS IGTAKNGEMM MENYYYTGGE SVEEENQKFI  300
FGNDHHGFNG WSTSTTTHHQ KQNGLIWEDN HELGFGSEQM KQLIVSNNNN SSVFSSDENK  360
TQGKVMYF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	7e-78	MYB family protein