PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026406751.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

SRS

Protein Properties

Length: 397aa MW: 43589.5 Da PI: 9.5287

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026406751.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	25.4	4.1e-08	70	129	5	63
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathv.kstWvpaakrrerqqqlaaasska 63 + +C CGn a+ C +e C+ CC C hv k p++k + +l +++ + XP_026406751.1 70 KPKCTTCGNVARSRCPYESCKNCCAKAQNPCPIHVlKISGTPSDKSPSSNPTLFEPQNAD 129 568*******************************95556667776666555555444444 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MAALPTPGPV QMINKNNTAI STRPSNTPVV AISALAAANS TAIAAASSIK PITIITETPT 60 PTKNKRGLNK PKCTTCGNVA RSRCPYESCK NCCAKAQNPC PIHVLKISGT PSDKSPSSNP 120 TLFEPQNADA TTLGTSIRAS ALRQLSQLNG SQVPRPRKPT TRKEAADINQ WRFSKLKEYK 180 DRNIETENEA FDRYMQNVNL LEEAFSLNSS VDGSSADEPT SSSLKDTDER VVHALKAKVG 240 SNIGRTDSVR ERIRDIVNQG LRKLQKVEFN DEVLSADADD LDSLKEPKRQ KKEKNVRAER 300 LLDIKDVIDK LKKARNEDDL QSCIRMKAQL FKGCGKASVT DNYVGRSKEQ IMGKDVIPGK 360 DLPATYVTKV DVSQELLHSL DAHFSSLEEI KCPLTSR

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MAALPTPGPV QMINKNNTAI STRPSNTPVV AISALAAANS TAIAAASSIK PITIITETPT  60
PTKNKRGLNK PKCTTCGNVA RSRCPYESCK NCCAKAQNPC PIHVLKISGT PSDKSPSSNP  120
TLFEPQNADA TTLGTSIRAS ALRQLSQLNG SQVPRPRKPT TRKEAADINQ WRFSKLKEYK  180
DRNIETENEA FDRYMQNVNL LEEAFSLNSS VDGSSADEPT SSSLKDTDER VVHALKAKVG  240
SNIGRTDSVR ERIRDIVNQG LRKLQKVEFN DEVLSADADD LDSLKEPKRQ KKEKNVRAER  300
LLDIKDVIDK LKKARNEDDL QSCIRMKAQL FKGCGKASVT DNYVGRSKEQ IMGKDVIPGK  360
DLPATYVTKV DVSQELLHSL DAHFSSLEEI KCPLTSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32730.1	1e-73	SRS family protein