PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026401536.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

SRS

Protein Properties

Length: 398aa MW: 43808.6 Da PI: 9.3937

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026401536.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	26.1	2.4e-08	70	127	5	61
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathv.kstWvpaakrrerqqqlaaass 61 + +C CGn a+ C +e C+ CC C hv k p++k + +l +++ XP_026401536.1 70 KPKCTTCGNVARSRCPYESCKNCCAKAQNPCPIHVlKTSGTPSDKSPSSNPTLFEPQN 127 568*******************************944456777776665544444443 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MAALPTPGPV QMINKNNTAI TTRPSNTPVV AISALAVANS TAIAAASSIK PITIITETPT 60 PTKNKRGLNK PKCTTCGNVA RSRCPYESCK NCCAKAQNPC PIHVLKTSGT PSDKSPSSNP 120 TLFEPQNADA TTPGTSIRAS ALRQLSQLNG SQVPRPRKPT TRKEAADINQ WRFSKLKEYK 180 DRNIETENEA FDRYMQNVNL LEEAFSLNSS VDGSSADEPT SSSLKDTDER VIHALKAKVG 240 SNIGRTDSVR ERIRDIVDQG SRKLQKVEFN DEVLSADADD LDSLKEPKRQ KKEKNVRAER 300 LLDIKDVIDK LKKARNEDDL QSCIRMKAQL FKGCGKASVT DDNYVGRSKE QIMGKDVMPG 360 KDLPPKYVTK VDVSQELLHS LDTHFSSLEE IKCPLTSR

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MAALPTPGPV QMINKNNTAI TTRPSNTPVV AISALAVANS TAIAAASSIK PITIITETPT  60
PTKNKRGLNK PKCTTCGNVA RSRCPYESCK NCCAKAQNPC PIHVLKTSGT PSDKSPSSNP  120
TLFEPQNADA TTPGTSIRAS ALRQLSQLNG SQVPRPRKPT TRKEAADINQ WRFSKLKEYK  180
DRNIETENEA FDRYMQNVNL LEEAFSLNSS VDGSSADEPT SSSLKDTDER VIHALKAKVG  240
SNIGRTDSVR ERIRDIVDQG SRKLQKVEFN DEVLSADADD LDSLKEPKRQ KKEKNVRAER  300
LLDIKDVIDK LKKARNEDDL QSCIRMKAQL FKGCGKASVT DDNYVGRSKE QIMGKDVMPG  360
KDLPPKYVTK VDVSQELLHS LDTHFSSLEE IKCPLTSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32730.1	2e-73	SRS family protein