PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026387129.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 387aa MW: 44444.1 Da PI: 5.1529

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026387129.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49.1	1.3e-15	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l + ++ +G g+W+++++ g+ R++k+c++rw++yl XP_026387129.1 17 KGLWSPEEDQKLFNHITTFGVGCWSSVPKQAGLQRCGKSCRLRWLNYL 64 678*******************************************97 PP
2	Myb_DNA-binding	43.3	8.7e-14	70	113	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E++ ++++++ lG++ W+ Ia+ ++ gRt++++k++w++ XP_026387129.1 70 RGLFSKQEEDHIIHLHEVLGNR-WAQIAAQLP-GRTDNEIKNFWNS 113 7889****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MGRQLQTCST SKQKLRKGLW SPEEDQKLFN HITTFGVGCW SSVPKQAGLQ RCGKSCRLRW 60 LNYLRPDLKR GLFSKQEEDH IIHLHEVLGN RWAQIAAQLP GRTDNEIKNF WNSSLKKKLK 120 QQGIDPNTHK ALLNTEIGHG RIDNKIYTAR GTENNIFQAS HPQQSFVNDN SNYLFPNEPQ 180 IGEYSSKDNF LTKPVFDPFP FSEFQSSAYE SIGMSTTNNS QLVFQCQQQN LTPLENTNHL 240 EMNPEFRFTS MRNLSSWSYD DLKVVDTADF SDNSTSRVST LSMNNNGMND NSSSTNNCHG 300 EFVIGTNNMI ENEGFSWDTA ETKLESLFGF QANEIKCEEV KLSSWEENQN QNQLNRQNNV 360 ENLNSFFFTT LTEDLTETSL DDFFEQI

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MGRQLQTCST SKQKLRKGLW SPEEDQKLFN HITTFGVGCW SSVPKQAGLQ RCGKSCRLRW  60
LNYLRPDLKR GLFSKQEEDH IIHLHEVLGN RWAQIAAQLP GRTDNEIKNF WNSSLKKKLK  120
QQGIDPNTHK ALLNTEIGHG RIDNKIYTAR GTENNIFQAS HPQQSFVNDN SNYLFPNEPQ  180
IGEYSSKDNF LTKPVFDPFP FSEFQSSAYE SIGMSTTNNS QLVFQCQQQN LTPLENTNHL  240
EMNPEFRFTS MRNLSSWSYD DLKVVDTADF SDNSTSRVST LSMNNNGMND NSSSTNNCHG  300
EFVIGTNNMI ENEGFSWDTA ETKLESLFGF QANEIKCEEV KLSSWEENQN QNQLNRQNNV  360
ENLNSFFFTT LTEDLTETSL DDFFEQI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	115	121	LKKKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01680.3	4e-70	MYB family protein