PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023911737.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

AP2

Protein Properties

Length: 354aa MW: 40157.4 Da PI: 8.8499

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023911737.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	45.9	1.4e-14	52	111	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d s n k+ k+++lg ++ +e Aa a++ a+ k++g XP_023911737.1 52 SRFRGVSRHRWTGRFEAHLWDkLSXNRtqkKKgKQVYLGAYDEEESAASAYDLAAIKYWG 111 789****************554477886448***********************98 PP
2	AP2	39.5	1.4e-12	154	206	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgt.aeeAakaaiaarkkleg 55 s+y+GV +++++grW+A+I + g +k+ +lg++ eeA a++ a+ +++g XP_023911737.1 154 SKYRGVARHHNNGRWEARIGRvF---G-NKYLNLGTYSNtQEEATCAYDIAAIEYRG 206 89**************99966...3.6****9889************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MSSTNQKRRR DTTVAALSNS DDNNQSDQNQ QQLPQQQVDQ TSSNATTVKR SSRFRGVSRH 60 RWTGRFEAHL WDKLSXNRTQ KKKGKQVYLG AYDEEESAAS AYDLAAIKYW GTTTFTNFPV 120 SDYEAEIEIM QSVTKEEYLA TLRRKSSGFS RGVSKYRGVA RHHNNGRWEA RIGRVFGNKY 180 LNLGTYSNTQ EEATCAYDIA AIEYRGINAV TNFDLFFFSF FFFLRIKLLL FIQLAGWLKP 240 GPNASLATHE LQAIPEPHTA SPSNYNPKEE SKSLFLLTNP LVTSYLKSPE KQDIFESKIP 300 ISSISKSSSP TTLGLLRSSV FKELVEKNSK IYEDDTNGEE PNNQAQMGSD DDFC

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MSSTNQKRRR DTTVAALSNS DDNNQSDQNQ QQLPQQQVDQ TSSNATTVKR SSRFRGVSRH  60
RWTGRFEAHL WDKLSXNRTQ KKKGKQVYLG AYDEEESAAS AYDLAAIKYW GTTTFTNFPV  120
SDYEAEIEIM QSVTKEEYLA TLRRKSSGFS RGVSKYRGVA RHHNNGRWEA RIGRVFGNKY  180
LNLGTYSNTQ EEATCAYDIA AIEYRGINAV TNFDLFFFSF FFFLRIKLLL FIQLAGWLKP  240
GPNASLATHE LQAIPEPHTA SPSNYNPKEE SKSLFLLTNP LVTSYLKSPE KQDIFESKIP  300
ISSISKSSSP TTLGLLRSSV FKELVEKNSK IYEDDTNGEE PNNQAQMGSD DDFC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	8e-71	AP2 family protein