PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023548502.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | ARR-B | ||||||||
Protein Properties | Length: 671aa MW: 74607 Da PI: 6.2497 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 86.5 | 2.6e-27 | 227 | 280 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gL++e+v+SHLQkYRl XP_023548502.1 227 KPRVVWSVELHQQFVIAVDQL-GIDKAVPKKILELMNVPGLSRENVASHLQKYRL 280 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 35.9 | 1.8e-11 | 229 | 279 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av qlG + +k+I + m+ g++++++ s++qky+ XP_023548502.1 229 RVVWSVELHQQFVIAVDQLGIDkaVPKKILELMNvPGLSRENVASHLQKYR 279 678***********************************************7 PP | |||||||
3 | Response_reg | 72.4 | 1.8e-24 | 49 | 157 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l++ y v+ + +e al +l+e++ +D++l D+ mp+mdG++ll++ e +lp+i+++a + ++ + + + G XP_023548502.1 49 VLVVDDDPTCLRILEKMLQNCCY-AVTKCNRAEIALSMLRENKngFDIVLSDVHMPDMDGFKLLEQVGLEM-DLPVIMMSADDGKNVVMKGVIHG 141 89*********************.***************999999**********************6644.8********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +e+l++ XP_023548502.1 142 ACDYLIKPVRIEALRN 157 *************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 671 aa Download sequence |
MALFCLWGYL SLWGMDPSHT KGMMPTSTSI SARKAADMGC DQFPAGLRVL VVDDDPTCLR 60 ILEKMLQNCC YAVTKCNRAE IALSMLRENK NGFDIVLSDV HMPDMDGFKL LEQVGLEMDL 120 PVIMMSADDG KNVVMKGVIH GACDYLIKPV RIEALRNIWQ HVVRKRKSEW KDLEQSGSMD 180 DGDRDQNVSE GANYSSSAYD GSWNSSKRKR DAEEELEERD DTSTLKKPRV VWSVELHQQF 240 VIAVDQLGID KAVPKKILEL MNVPGLSREN VASHLQKYRL YLRRLSGVSP HPSNLNNSFM 300 NPQDHPPFGS MASSYNGIDL QTLLVTGQLS PQSLAALQAT GLRRPTVKST LPMALVDQNN 360 IFSFENPKLR FGEDQTQHLN NTKPVSLFHG IPTKMEPKQL ANMQHPSVQT QRNMNMNMNM 420 PLNIKSEHGG TQLMHLSQQQ TVGQTLNNST VAHHLPGIPS TLRNPIISGS VTTGNGTADN 480 SHVPRYNLVS PTSVMVNYPM SQTTEVFQEE MNSNLKVSSG VMSSYGVFSD LHMQKSHDWD 540 SQNVSTLAFG TPHHGNFIHH SFDISPSSLI HHGFPSSQTN GENHNSSVNG KTNFSFLDST 600 QPGIPQSVAH NSFFDPGEVK NQIIPDASYQ TDLLSEDFGQ DELLGVFLKQ EQQEDNGSVD 660 FSGYKTENIC V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 1e-159 | ARR-B family protein |