PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023542775.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 195aa MW: 22391.7 Da PI: 10.5205 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 84.5 | 6.4e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqv+fskRrng+lKKA+EL vLCdaevav+ifs++gk y +ss XP_023542775.1 9 KRIENPTSRQVSFSKRRNGVLKKAYELAVLCDAEVAVVIFSPSGKAYQFSS 59 79***********************************************96 PP | |||||||
2 | K-box | 67.4 | 4.8e-23 | 86 | 169 | 15 | 98 |
K-box 15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++ e++ +++ i +L+ +Rh+ GedLe+L++keL++Le+qL +++++Rsk +++ e++++l+kk k lqee+ +L+k+l XP_023542775.1 86 LVWKSEMEDMNRSITSLEARLRHFSGEDLEPLTVKELKRLERQLSVGIERVRSKMRRIISEHTNQLKKKYKGLQEEHSRLQKRL 169 5699*****************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MGRGKVEVKR IENPTSRQVS FSKRRNGVLK KAYELAVLCD AEVAVVIFSP SGKAYQFSSH 60 DIDGTLARYR KYVGQSQFNH PLSRALVWKS EMEDMNRSIT SLEARLRHFS GEDLEPLTVK 120 ELKRLERQLS VGIERVRSKM RRIISEHTNQ LKKKYKGLQE EHSRLQKRLN QLKDVADTTA 180 KVSDADGVSV LEMFV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26310.1 | 4e-45 | MIKC_MADS family protein |