PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023538735.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 212aa MW: 24235.6 Da PI: 9.7719 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 88.5 | 3.5e-28 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRrng+lKKA+ELSvLC+a+va+iifsstgkl e++s XP_023538735.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCEADVALIIFSSTGKLCEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 65.3 | 2.2e-22 | 84 | 170 | 12 | 98 |
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 ++ ++a L k ie+L+ ++R+llG++L+s s++eLqq++qqL++sl ++R++K+e+++eqi++l++kek l en++L kk+ XP_023538735.1 84 PHHHDQADQAATLLKGIESLEVSKRKLLGQGLGSSSYEELQQIQQQLQRSLAHVRATKHEVYKEQIDQLKEKEKYLAAENEKLAKKY 170 45666678899999*********************************************************************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCE ADVALIIFSS TGKLCEFASS 60 SMQATVERFQ RHTRETHHLE RSLPHHHDQA DQAATLLKGI ESLEVSKRKL LGQGLGSSSY 120 EELQQIQQQL QRSLAHVRAT KHEVYKEQID QLKEKEKYLA AENEKLAKKY LVQLEPRQSL 180 TQVGEVSPYL ETSLTFDVET DLFIGPPKSR SK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 3e-66 | MIKC_MADS family protein |