PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023538103.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 239aa MW: 27512.9 Da PI: 5.6827 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 95.7 | 2e-30 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+ienk+nrqvtf+kRrng+lKKA+ELS+LCdaeva+i+fs+ gklye+ss XP_023538103.1 9 KKIENKINRQVTFTKRRNGLLKKAYELSILCDAEVALIVFSTGGKLYEFSS 59 68***********************************************96 PP | |||||||
2 | K-box | 85.3 | 1.3e-28 | 82 | 173 | 9 | 100 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + +++e++++e+ kLkke+e Lq++qR++lGe+Le+L+ +eL qLe qLe+slk+iR +Kn+ +++q++el+kke+ l e+n+aLr+klee XP_023538103.1 82 HHLKDTEKWYEEYLKLKKEVEGLQHSQRRILGEELEDLETNELDQLEIQLETSLKQIRFTKNQTVFDQLSELKKKEELLLETNQALRRKLEE 173 456789***********************************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MGRGKVELKK IENKINRQVT FTKRRNGLLK KAYELSILCD AEVALIVFST GGKLYEFSSS 60 SSIAKTLERY QRHSYGALAA SHHLKDTEKW YEEYLKLKKE VEGLQHSQRR ILGEELEDLE 120 TNELDQLEIQ LETSLKQIRF TKNQTVFDQL SELKKKEELL LETNQALRRK LEESSAALHS 180 SWEASEPNNL HYCGQPEAFL QGNNIALENS YNPAEVSNQE NAINSEPEGN ELPSHWMML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03710.1 | 1e-55 | MIKC_MADS family protein |