PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023535114.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 317aa    MW: 35679.5 Da    PI: 8.7411
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023535114.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1707.7e-53171451128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeelvv+yLkkk+++ +l++  +i+evd+yk++Pw+Lp+k+  +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk+v++ 
  XP_023535114.1  17 LPPGFRFHPTDEELVVHYLKKKATSLPLPV-AIIAEVDLYKYDPWELPAKACYGEEEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVIAL 110
                     79****************************.88***************7777789*************************************987 PP

             NAM  96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++++vg+kk Lvfy g+ pkg kt+W+mheyrl
  XP_023535114.1 111 seGNRKVGVKKALVFYGGKPPKGIKTNWIMHEYRL 145
                     668899***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MESSKSAPEI DKDRPNLPPG FRFHPTDEEL VVHYLKKKAT SLPLPVAIIA EVDLYKYDPW  60
ELPAKACYGE EEWYFFSPRD RKYPNGARPN RAATSGYWKA TGTDKPVIAL SEGNRKVGVK  120
KALVFYGGKP PKGIKTNWIM HEYRLADKPD SGNNKPPEFY IGSKKSSMRL DDWVLCRIYK  180
KTISNKSGVD HELKDCFSYM GDLIPPSITI HGYNQQTTTT TTAATMNRSV YSELPSLSLP  240
TKRRLQPTSS WDEEEYQSAN DQPLSKRLQL MNGGGVDDNN PIAALLSKLP QPTLQGCIVG  300
DGIFRPAIEL PETNWYS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15510.11e-100NAC family protein