PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023533775.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 309aa    MW: 35734.1 Da    PI: 6.4234
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023533775.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM171.23.2e-5361331128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     lppGfrFhPtdeelv +yLk+kveg ++el evi+ +d+yk++Pw+Lp k  + +++ ew+fF++rd+ky++g+r+nratk+gyWkatgkd++++
  XP_023533775.1   6 LPPGFRFHPTDEELVGYYLKRKVEGLPIEL-EVIPVIDLYKFDPWELPeKsFLPKRDMEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDRKIH 99 
                     79****************************.99**************95344555788************************************* PP

             NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + +++++g +ktLvfy+grap g + dWvmheyrl
  XP_023533775.1 100 C-QSSVIGYRKTLVFYRGRAPLGDRMDWVMHEYRL 133
                     *.999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MGSASLPPGF RFHPTDEELV GYYLKRKVEG LPIELEVIPV IDLYKFDPWE LPEKSFLPKR  60
DMEWFFFCPR DRKYPNGSRT NRATKAGYWK ATGKDRKIHC QSSVIGYRKT LVFYRGRAPL  120
GDRMDWVMHE YRLCDDFSHG TPNFKGAFAL CRILKRNEQT HKKENHRDPK GNVVGTSRVR  180
EDSTSTRLVV ANEVSNNLSQ TNFLADGSCL SSSMTTSYDT NPMSLYSTTI METDPEKIWI  240
SPDFILDSSK DYPEMEGAMS VCFPQFEYFG STTPWQSYEH TEMSPSSSYS NYTADIELED  300
HTQHINYMQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17980.11e-109NAC family protein