PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023530758.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family MYB_related
Protein Properties Length: 275aa    MW: 30765.8 Da    PI: 6.18
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023530758.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.53.7e-14243447
                     S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     ++++E++l++ +++ lG++ W+ Ia+ ++ gRt++++k++w++ 
   XP_023530758.1  2 FSQQEEDLIISLHEVLGNR-WAQIAAQLP-GRTDNEIKNFWNSC 43
                     89*****************.*********.***********975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MFSQQEEDLI ISLHEVLGNR WAQIAAQLPG RTDNEIKNFW NSCLKKKLMK QGIDPATHKP  60
LEENMEGMQD QKPRMGAAPH HLHGNISNLT ISSNDSNHHY KQIEDSSHHF VNKIEFDSLS  120
SYFGAPIQHQ SSIRSCDQNF LYSSSSFGMP SYSSSEHGNT SRTDFSENSA SGLSSFFMNE  180
VKESSSNSSV VSNYSGFHGK LNNGGYSWEA ENKLESLFQF QTNEVKNMEL MKGSSSREET  240
KMIQTQNNSS NFGSYPLMSM SENAGGGSFG VFHQI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01680.38e-31MYB family protein